RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 AKNAD1Q5T1N1 836 aa13.58□□□□□ -0.24
SMARCAL1-201ENST00000357276 YTHDF3Q7Z739 585 aaKnown RBP13.58□□□□□ -0.24
SMARCAL1-201ENST00000357276 VGLL2Q8N8G2 317 aa13.58□□□□□ -0.24
SMARCAL1-201ENST00000357276 NELFBQ8WX92 580 aa13.58□□□□□ -0.24
SMARCAL1-201ENST00000357276 RNF26Q9BY78 433 aaPredicted RBP13.58□□□□□ -0.24
SMARCAL1-201ENST00000357276 KRT23Q9C075 422 aa13.58□□□□□ -0.24
SMARCAL1-201ENST00000357276 TAOK2Q9UL54 1235 aa13.58□□□□□ -0.24
SMARCAL1-201ENST00000357276 SHTN1A0MZ66 631 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 COBLO75128 1261 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 PKN1Q16512 942 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 TTMPQ5BVD1 217 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 RRAGBQ5VZM2 374 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 ALS2CLQ60I27 953 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 IQCEQ6IPM2 695 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 SPATS2Q86XZ4 545 aaKnown RBP13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 IFNL3Q8IZI9 196 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 STAG1Q8WVM7 1258 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 CAVIN3Q969G5 261 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 CAPZA3Q96KX2 299 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 LUC7L2Q9Y383 392 aaKnown RBP13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 H7C1D1 291 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 GTPBP6O43824 516 aaPredicted RBP13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 ATP2C1P98194 919 aaPredicted RBP13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 CTDSPL2Q05D32 466 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 ANKRD20A12PQ8NF67 263 aa13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 RRP36Q96EU6 259 aaKnown RBP13.57□□□□□ -0.24
SMARCAL1-201ENST00000357276 RASSF10A6NK89 507 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 CLSTN1O94985 981 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 APPP05067 770 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 ARID4AP29374 1257 aaPredicted RBP13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 CDK17Q00537 523 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 FUT2Q10981 343 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 CCDC170Q8IYT3 715 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 FANCBQ8NB91 859 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 TACO1Q9BSH4 297 aaKnown RBP13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 GNL3LQ9NVN8 582 aaKnown RBP13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 MYH3P11055 1940 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 OPA1O60313 960 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 PARP1P09874 1014 aaKnown RBP13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 C2orf54Q08AI8 447 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 TRIM28Q13263 835 aaKnown RBP13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 NPY5RQ15761 445 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 PAXIP1Q6ZW49 1069 aaPredicted RBP13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 B4GALNT4Q76KP1 1039 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 CARD10Q9BWT7 1032 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 PRDM11Q9NQV5 511 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 SNX12Q9UMY4 172 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 EEF1GP26641 437 aaKnown RBP13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 EMBQ6PCB8 327 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 TMTC2Q8N394 836 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 HDAC7Q8WUI4 952 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 VPS54Q9P1Q0 977 aa13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 DMGDHQ9UI17 866 aaKnown RBP13.56□□□□□ -0.24
SMARCAL1-201ENST00000357276 LRP5O75197 1615 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 MAP2K2P36507 400 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 ANKRD18AQ8IVF6 992 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 PYM1Q9BRP8 204 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 DONSONQ9NYP3 566 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 CCDC172P0C7W6 258 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 PRCPP42785 496 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 EPHB4P54760 987 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 WTAPQ15007 396 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 PPP2R5BQ15173 497 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 SND1Q7KZF4 910 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 ADSSL1Q8N142 457 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 CMTR1Q8N1G2 835 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 GPATCH11Q8N954 259 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 TSEN2Q8NCE0 465 aaKnown RBP13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 ARL8AQ96BM9 186 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 LRRC1Q9BTT6 524 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 BLZF1Q9H2G9 400 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 NLRP2Q9NX02 1062 aa13.55□□□□□ -0.24
SMARCAL1-201ENST00000357276 GSG1L2A8MUP6 293 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 MEFVO15553 781 aaPredicted RBP13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 SRGNP10124 158 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 KRT2P35908 639 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 MNAT1P51948 309 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 NNTQ13423 1086 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 EZH2Q15910 746 aaKnown RBP13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 SKIDA1Q1XH10 827 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 ZNF654Q8IZM8 581 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 CABS1Q96KC9 395 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 RMND1Q9NWS8 449 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 GGA2Q9UJY4 613 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 C21orf2O43822 256 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 GPTP24298 496 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 ATP6V1AP38606 617 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 TCIRG1Q13488 830 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 RETREG2Q8NC44 543 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 STAMQ92783 540 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 AIDAQ96BJ3 306 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 ZBTB3Q9H5J0 574 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 THAP9Q9H5L6 903 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 DUSP10Q9Y6W6 482 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 RPN1P04843 607 aaKnown RBP13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 PCCAP05165 728 aaPredicted RBP13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 CYLC1P35663 651 aaPredicted RBP13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 CABP4P57796 275 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 SEC23AQ15436 765 aa13.54□□□□□ -0.24
SMARCAL1-201ENST00000357276 IL17AQ16552 155 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms