RNA–Protein interactions for RNA: ENST00000357089.8

UBXN11-202, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene UBXN11, Length 1,555 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-202ENST00000357089 CTDNEP1O95476 244 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 USP17L24Q0WX57 530 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 CUL4AQ13619 759 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 NTRK3Q16288 839 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 BRI3BPQ8WY22 251 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 PHKBQ93100 1093 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 VAT1LQ9HCJ6 419 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 FOXD4L1Q9NU39 408 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 FBXO28Q9NVF7 368 aa17.05■□□□□ 0.32
UBXN11-202ENST00000357089 MANSC4A6NHS7 340 aaPredicted RBP17.04■□□□□ 0.32
UBXN11-202ENST00000357089 HSP90AA1P07900 732 aaKnown RBP17.04■□□□□ 0.32
UBXN11-202ENST00000357089 SLC4A3P48751 1232 aa17.04■□□□□ 0.32
UBXN11-202ENST00000357089 GPAT2Q6NUI2 795 aa17.04■□□□□ 0.32
UBXN11-202ENST00000357089 CATSPERGQ6ZRH7 1159 aa17.04■□□□□ 0.32
UBXN11-202ENST00000357089 FAM160B2Q86V87 743 aa17.04■□□□□ 0.32
UBXN11-202ENST00000357089 NSUN7Q8NE18 718 aaKnown RBP17.04■□□□□ 0.32
UBXN11-202ENST00000357089 CHURC1Q8WUH1 139 aa17.04■□□□□ 0.32
UBXN11-202ENST00000357089 PIBF1Q8WXW3 757 aa17.04■□□□□ 0.32
UBXN11-202ENST00000357089 KIFC2Q96AC6 838 aa17.04■□□□□ 0.32
UBXN11-202ENST00000357089 CAPNS2Q96L46 248 aa17.04■□□□□ 0.32
UBXN11-202ENST00000357089 CYTH3O43739 400 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 CDKL5O76039 1030 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 IFNAR1P17181 557 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 SLC35G1Q2M3R5 365 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 SYDE2Q5VT97 1194 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 BTNL9Q6UXG8 535 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 SPRYD3Q8NCJ5 442 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 SLF1Q9BQI6 1058 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 SLC26A6Q9BXS9 759 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 CNTNAP5Q8WYK1 1306 aa17.03■□□□□ 0.32
UBXN11-202ENST00000357089 hCG_1642624A0A1W2PR95 340 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 PTPDC1A2A3K4 754 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 BTBD19C9JJ37 291 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 JAK2O60674 1132 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 PLA2G6O60733 806 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 HOXA7P31268 230 aaPredicted RBP17.02■□□□□ 0.32
UBXN11-202ENST00000357089 SSRP1Q08945 709 aaKnown RBP17.02■□□□□ 0.32
UBXN11-202ENST00000357089 FUT2Q10981 343 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 PABPC4Q13310 644 aaKnown RBP eCLIP17.02■□□□□ 0.32
UBXN11-202ENST00000357089 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.32
UBXN11-202ENST00000357089 ZIC5Q96T25 663 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 PTPN18Q99952 460 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 LLPHQ9BRT6 129 aaKnown RBP17.02■□□□□ 0.32
UBXN11-202ENST00000357089 SPZ1Q9BXG8 430 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 RIOX1Q9H6W3 641 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 PRR12Q9ULL5 1215 aa17.02■□□□□ 0.32
UBXN11-202ENST00000357089 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.02■□□□□ 0.32
UBXN11-202ENST00000357089 TESPA1A2RU30 521 aaPredicted RBP17.02■□□□□ 0.31
UBXN11-202ENST00000357089 PDHXO00330 501 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 AOC2O75106 756 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 SMARCA1P28370 1054 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 IRX3P78415 501 aaPredicted RBP17.02■□□□□ 0.31
UBXN11-202ENST00000357089 NOGQ13253 232 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 COG2Q14746 738 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 HOMER1Q86YM7 354 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 TRIM22Q8IYM9 498 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 DDX11Q96FC9 970 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 JMJD4Q9H9V9 463 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 DAXXQ9UER7 740 aaPredicted RBP17.02■□□□□ 0.31
UBXN11-202ENST00000357089 PPP1R9AQ9ULJ8 1098 aa17.02■□□□□ 0.31
UBXN11-202ENST00000357089 V9GY48 417 aaPredicted RBP17.02■□□□□ 0.31
UBXN11-202ENST00000357089 FMNL1O95466 1100 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-202ENST00000357089 OSBPP22059 807 aa17.01■□□□□ 0.31
UBXN11-202ENST00000357089 INHBEP58166 350 aa17.01■□□□□ 0.31
UBXN11-202ENST00000357089 SNAP25P60880 206 aa17.01■□□□□ 0.31
UBXN11-202ENST00000357089 AKAP17AQ02040 695 aaKnown RBP17.01■□□□□ 0.31
UBXN11-202ENST00000357089 KIF23Q02241 960 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-202ENST00000357089 SREBF2Q12772 1141 aa17.01■□□□□ 0.31
UBXN11-202ENST00000357089 ANKRD23Q86SG2 305 aa17.01■□□□□ 0.31
UBXN11-202ENST00000357089 INTS4Q96HW7 963 aaKnown RBP17.01■□□□□ 0.31
UBXN11-202ENST00000357089 ASCC2Q9H1I8 757 aaPredicted RBP17.01■□□□□ 0.31
UBXN11-202ENST00000357089 SMC3Q9UQE7 1217 aa17.01■□□□□ 0.31
UBXN11-202ENST00000357089 DSG3P32926 999 aa17■□□□□ 0.31
UBXN11-202ENST00000357089 SMARCC2Q8TAQ2 1214 aa17■□□□□ 0.31
UBXN11-202ENST00000357089 ATG4CQ96DT6 458 aa17■□□□□ 0.31
UBXN11-202ENST00000357089 RRP36Q96EU6 259 aaKnown RBP17■□□□□ 0.31
UBXN11-202ENST00000357089 PIGSQ96S52 555 aa17■□□□□ 0.31
UBXN11-202ENST00000357089 P2RX7Q99572 595 aaKnown RBP17■□□□□ 0.31
UBXN11-202ENST00000357089 RNF26Q9BY78 433 aaPredicted RBP17■□□□□ 0.31
UBXN11-202ENST00000357089 HOXC10Q9NYD6 342 aa17■□□□□ 0.31
UBXN11-202ENST00000357089 ORC3Q9UBD5 711 aaPredicted RBP17■□□□□ 0.31
UBXN11-202ENST00000357089 WDR33Q9C0J8 1336 aaKnown RBP17■□□□□ 0.31
UBXN11-202ENST00000357089 IGF2BP3O00425 579 aaKnown RBP eCLIP16.99■□□□□ 0.31
UBXN11-202ENST00000357089 PRPF3O43395 683 aaKnown RBP16.99■□□□□ 0.31
UBXN11-202ENST00000357089 VEGFBP49765 207 aa16.99■□□□□ 0.31
UBXN11-202ENST00000357089 CDC37Q16543 378 aaPredicted RBP16.99■□□□□ 0.31
UBXN11-202ENST00000357089 SEC63Q9UGP8 760 aaKnown RBP16.99■□□□□ 0.31
UBXN11-202ENST00000357089 PNMA3Q9UL41 463 aa16.99■□□□□ 0.31
UBXN11-202ENST00000357089 SLC45A1Q9Y2W3 748 aa16.99■□□□□ 0.31
UBXN11-202ENST00000357089 SPDYE16A6NNV3 312 aaPredicted RBP16.98■□□□□ 0.31
UBXN11-202ENST00000357089 CYP2C8P10632 490 aa16.98■□□□□ 0.31
UBXN11-202ENST00000357089 FDPSP14324 419 aaKnown RBP16.98■□□□□ 0.31
UBXN11-202ENST00000357089 GJB2P29033 226 aa16.98■□□□□ 0.31
UBXN11-202ENST00000357089 HMGN5P82970 282 aaKnown RBP16.98■□□□□ 0.31
UBXN11-202ENST00000357089 CCDC174Q6PII3 467 aa16.98■□□□□ 0.31
UBXN11-202ENST00000357089 IFNL1Q8IU54 200 aa16.98■□□□□ 0.31
UBXN11-202ENST00000357089 MTMR8Q96EF0 704 aa16.98■□□□□ 0.31
UBXN11-202ENST00000357089 RANBP17Q9H2T7 1088 aaKnown RBP16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms