RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 ACTN3Q08043 901 aaPredicted RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 PPP1R21Q6ZMI0 780 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 KIF6Q6ZMV9 814 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 SDCCAG8Q86SQ7 713 aaPredicted RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 NAPBQ9H115 298 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 RPL26L1Q9UNX3 145 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 NFAT5O94916 1531 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 RTN1Q16799 776 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 TBC1D5Q92609 795 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 EDEM3Q9BZQ6 932 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC113Q9H0I3 377 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 PPANQ9NQ55 473 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 KLF18A0A0U1RQI7 1052 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 MACROD2A1Z1Q3 448 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 SNUPNO95149 360 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 FAM107AO95990 144 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CALCOCO2Q13137 446 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 RASGRP2Q7LDG7 609 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 SESTD1Q86VW0 696 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 RAPGEF4Q8WZA2 1011 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 ESR2Q92731 530 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 THAP9Q9H5L6 903 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 SEC63Q9UGP8 760 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 MCM8Q9UJA3 840 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 hCG_1984214I3L0E3 225 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CLTAP09496 248 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 SLC35F6Q8N357 371 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 ZNF713Q8N859 430 aaPredicted RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 EPC1Q9H2F5 836 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 MAP2K7O14733 419 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC62Q6P9F0 684 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 PRPF38AQ8NAV1 312 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 VCPKMTQ9H867 229 aa7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CHCHD3Q9NX63 227 aaKnown RBP7.26□□□□□ -1.25
TRIM38-201ENST00000357085 CEP104O60308 925 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 NDUFA8P51970 172 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 VSNL1P62760 191 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 TRIM68Q6AZZ1 485 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 CCDC63Q8NA47 563 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 ATP6V1G3Q96LB4 118 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 FAM192AQ9GZU8 254 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 GOPCQ9HD26 462 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 FANCLQ9NW38 375 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 KCNJ18B7U540 433 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 STAMBPO95630 424 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 KCNJ12Q14500 433 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 PODNQ7Z5L7 613 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 MYO1EQ12965 1108 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 TRPC3Q13507 836 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 PNOCQ13519 176 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SLC9C1Q4G0N8 1177 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 TEX13AQ9BXU3 409 aaPredicted RBP7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SCOCQ9UIL1 159 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SOS2Q07890 1332 aaPredicted RBP7.25□□□□□ -1.25
TRIM38-201ENST00000357085 A0A1B0GTH6 734 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 CTNNA1P35221 906 aaKnown RBP7.25□□□□□ -1.25
TRIM38-201ENST00000357085 DDR1Q08345 913 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 NME8Q8N427 588 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 LINC00301Q8NCQ3 95 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 DDX27Q96GQ7 796 aaKnown RBP7.25□□□□□ -1.25
TRIM38-201ENST00000357085 USP28Q96RU2 1077 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 BOLA2Q9H3K6 86 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.25□□□□□ -1.25
TRIM38-201ENST00000357085 CDHR2Q9BYE9 1310 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SASH1O94885 1247 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 PREPLQ4J6C6 727 aaPredicted RBP7.25□□□□□ -1.25
TRIM38-201ENST00000357085 FOXR1Q6PIV2 292 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 KDM7AQ6ZMT4 941 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 PBKQ96KB5 322 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SELENOSQ9BQE4 189 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 ARL6IP4Q66PJ3 421 aaKnown RBP7.25□□□□□ -1.25
TRIM38-201ENST00000357085 NLRP14Q86W24 1093 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 PHACTR3Q96KR7 559 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 KIF9Q9HAQ2 790 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 PDP2Q9P2J9 529 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 TECPR2O15040 1411 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 N4BP1O75113 896 aaKnown RBP7.25□□□□□ -1.25
TRIM38-201ENST00000357085 UBA7P41226 1012 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SLF1Q9BQI6 1058 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 CRYBG1Q9Y4K1 1723 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 MYO1FO00160 1098 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 JAK2O60674 1132 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SLIT3O75094 1523 aa7.25□□□□□ -1.25
TRIM38-201ENST00000357085 SOWAHDA6NJG2 315 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 ADCY2Q08462 1091 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 LRRN4CLQ8ND94 238 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 UBLCP1Q8WVY7 318 aaPredicted RBP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 TMEM131LA2VDJ0 1609 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 PDCLQ13371 301 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 LAMB3Q13751 1172 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 MUM1Q2TAK8 710 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 ANKLE2Q86XL3 938 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 CD248Q9HCU0 757 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 SETD1AO15047 1707 aaKnown RBP7.24□□□□□ -1.25
TRIM38-201ENST00000357085 LMTK3Q96Q04 1460 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 GAS8O95995 478 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 IRAK1P51617 712 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 ZBED6P86452 979 aa7.24□□□□□ -1.25
TRIM38-201ENST00000357085 PSMD2Q13200 908 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms