RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 STXBP3O00186 592 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 YEATS4O95619 227 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 HLA-DOAP06340 250 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 KIF5BP33176 963 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 GRM4Q14833 912 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 CCDC174Q6PII3 467 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 KIAA1468Q9P260 1216 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 PCDHA6Q9UN73 950 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 PCDHA8Q9Y5H6 950 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 KIAA1551Q9HCM1 1747 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 TNS1Q9HBL0 1735 aaKnown RBP15.86■□□□□ 0.13
LSS-201ENST00000356396 PALM3A6NDB9 673 aaPredicted RBP15.86■□□□□ 0.13
LSS-201ENST00000356396 TICAM2Q86XR7 235 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 OGFOD1Q8N543 542 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 PIM2Q9P1W9 311 aa15.86■□□□□ 0.13
LSS-201ENST00000356396 PDS5AQ29RF7 1337 aaKnown RBP15.86■□□□□ 0.13
LSS-201ENST00000356396 PLCG2P16885 1265 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 SLC1A4P43007 532 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 ICA1Q05084 483 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 SLF2Q8IX21 1173 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 WASF1Q92558 559 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 ZDHHC15Q96MV8 337 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.85■□□□□ 0.133e-7■□□□□ 10.4
LSS-201ENST00000356396 XBP1P17861 261 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 TECP42680 631 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 TXKP42681 527 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 CCDC186Q7Z3E2 898 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 DPF2Q92785 391 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 FAM163AQ96GL9 167 aaPredicted RBP15.85■□□□□ 0.13
LSS-201ENST00000356396 ARID3AQ99856 593 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 JMJD4Q9H9V9 463 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 HOMER2Q9NSB8 354 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 PKD2L1Q9P0L9 805 aa15.85■□□□□ 0.13
LSS-201ENST00000356396 TMEM232C9JQI7 657 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 WNT10BO00744 389 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 FCHSD1Q86WN1 690 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 POTEDQ86YR6 584 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 DHX40Q8IX18 779 aaKnown RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 TBCKQ8TEA7 893 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 P2RX7Q99572 595 aaKnown RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 FOXP1Q9H334 677 aaPredicted RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 RBM28Q9NW13 759 aaKnown RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 PYCARDQ9ULZ3 195 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 POTEMA6NI47 508 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 SORBS3O60504 671 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 TOP1P11387 765 aaKnown RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 CMA1P23946 247 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 CACNB1Q02641 598 aaPredicted RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 NIM1KQ8IY84 436 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 TSC1Q92574 1164 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 CDK5RAP2Q96SN8 1893 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 SMC2O95347 1197 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 DALRD3Q5D0E6 543 aaKnown RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 RSBN1LQ6PCB5 846 aaPredicted RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 TNFRSF25Q93038 417 aa15.84■□□□□ 0.13
LSS-201ENST00000356396 ZNF70Q9UC06 446 aaPredicted RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 SEC63Q9UGP8 760 aaKnown RBP15.84■□□□□ 0.13
LSS-201ENST00000356396 GOLGA6L19H0YKK7 550 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 SLC37A4O43826 429 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 TTLL1O95922 423 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 FMR1Q06787 632 aaKnown RBP eCLIP15.83■□□□□ 0.12
LSS-201ENST00000356396 RILPL1Q5EBL4 403 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 CYP2W1Q8TAV3 490 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 KIFC2Q96AC6 838 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 PURBQ96QR8 312 aaKnown RBP15.83■□□□□ 0.12
LSS-201ENST00000356396 TIAM2Q8IVF5 1701 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 STK36Q9NRP7 1315 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 SPDYE2BA6NHP3 402 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 F5H6K3 240 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 SPDYE6P0CI01 402 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 KLRC3Q07444 240 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 IQCB1Q15051 598 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 ABCB5Q2M3G0 1257 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 RESP18Q5W5W9 173 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 HHIPL2Q6UWX4 724 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 ARHGAP27Q6ZUM4 889 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 PPP1R9BQ96SB3 815 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 NUDT12Q9BQG2 462 aa15.83■□□□□ 0.12
LSS-201ENST00000356396 PTPREP23469 700 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 SLFN13Q68D06 897 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 RRP36Q96EU6 259 aaKnown RBP15.82■□□□□ 0.12
LSS-201ENST00000356396 KCNF1Q9H3M0 494 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 BCAS3Q9H6U6 928 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 CALM1P0DP23 149 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 CALM2P0DP24 149 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 CALM3P0DP25 149 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 KRBA2Q6ZNG9 492 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 CPXCR1Q8N123 301 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 JDP2Q8WYK2 163 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 MTRQ99707 1265 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 PI4KBQ9UBF8 816 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 NAV1Q8NEY1 1877 aa15.82■□□□□ 0.12
LSS-201ENST00000356396 MSNP26038 577 aaKnown RBP15.81■□□□□ 0.12
LSS-201ENST00000356396 CUL4BQ13620 913 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 FAM83BQ5T0W9 1011 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 PDLIM2Q96JY6 352 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 TAOK3Q9H2K8 898 aa15.81■□□□□ 0.12
LSS-201ENST00000356396 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.81■□□□□ 0.12
LSS-201ENST00000356396 ZKSCAN4Q969J2 545 aaPredicted RBP15.81■□□□□ 0.12
LSS-201ENST00000356396 SH2D3AQ9BRG2 576 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms