RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 U2AF1L4Q8WU68 220 aaKnown RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 LZICQ8WZA0 190 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 CCDC87Q9NVE4 849 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 POC1B-GALNT4F8VUJ3 575 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 HS1BP3Q53T59 392 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 C2CD5Q86YS7 1000 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 LSM14BQ9BX40 385 aaKnown RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 LLGL1Q15334 1064 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 FAM47AQ5JRC9 791 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 ZNF513Q8N8E2 541 aaPredicted RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 RIC8AQ9NPQ8 531 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 H3BRJ5 948 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 THAP12O43422 761 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 GTF2IP78347 998 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 SFMBT2Q5VUG0 894 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 BRAPQ7Z569 592 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 TRIM59Q8IWR1 403 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 PRPF38AQ8NAV1 312 aaKnown RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 CCNYQ8ND76 341 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 NPHP3Q7Z494 1330 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 ADGRF5Q8IZF2 1346 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 TRMT10CQ7L0Y3 403 aaKnown RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 SECISBP2LQ93073 1101 aaKnown RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 IFT122Q9HBG6 1241 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 TAB2Q9NYJ8 693 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 DDX41Q9UJV9 622 aaKnown RBP18.9■□□□□ 0.62
COL27A1-201ENST00000356083 SCNN1DP51172 638 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
COL27A1-201ENST00000356083 SOX5P35711 763 aa18.89■□□□□ 0.62
COL27A1-201ENST00000356083 MYL5Q02045 173 aa18.89■□□□□ 0.62
COL27A1-201ENST00000356083 KRT24Q2M2I5 525 aa18.89■□□□□ 0.62
COL27A1-201ENST00000356083 SYCE1Q8N0S2 351 aa18.89■□□□□ 0.62
COL27A1-201ENST00000356083 TTF2Q9UNY4 1162 aaKnown RBP18.89■□□□□ 0.62
COL27A1-201ENST00000356083 RAB44Q7Z6P3 723 aaPredicted RBP18.89■□□□□ 0.62
COL27A1-201ENST00000356083 NELFBQ8WX92 580 aa18.89■□□□□ 0.62
COL27A1-201ENST00000356083 TTC25Q96NG3 672 aa18.89■□□□□ 0.62
COL27A1-201ENST00000356083 TEKT2Q9UIF3 430 aa18.89■□□□□ 0.62
COL27A1-201ENST00000356083 TSR3Q9UJK0 312 aaKnown RBP18.89■□□□□ 0.62
COL27A1-201ENST00000356083 TUBB4BP68371 445 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 RUFY4Q6ZNE9 571 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 CMTR1Q8N1G2 835 aaKnown RBP18.89■□□□□ 0.61
COL27A1-201ENST00000356083 SEPT9Q9UHD8 586 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-201ENST00000356083 KDRP35968 1356 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 DNAAF3Q8N9W5 541 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 OTULINQ96BN8 352 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 AMFRQ9UKV5 643 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 SLC8A2Q9UPR5 921 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 TMEM191BP0C7N4 346 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 EEF1GP26641 437 aaKnown RBP18.89■□□□□ 0.61
COL27A1-201ENST00000356083 FAM186BQ8IYM0 893 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 TTC1Q99614 292 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 PPFIA4O75335 1185 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 PYGLP06737 847 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 POLR2BP30876 1174 aaKnown RBP18.89■□□□□ 0.61
COL27A1-201ENST00000356083 ELF1P32519 619 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 EPHB1P54762 984 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 VCPP55072 806 aaKnown RBP18.89■□□□□ 0.61
COL27A1-201ENST00000356083 CFAP61Q8NHU2 1237 aa18.89■□□□□ 0.61
COL27A1-201ENST00000356083 NFKBIL1Q9UBC1 381 aaPredicted RBP18.89■□□□□ 0.61
COL27A1-201ENST00000356083 BMP2KLQ5H9B9 411 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 K7ENM7 598 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 ZNF18P17022 549 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 RPGRIP1Q96KN7 1286 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 KCNK3O14649 394 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 AP5M1Q9H0R1 490 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 MYO9BQ13459 2157 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 WDR97A6NE52 1622 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 IRX4P78413 519 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 PDZD4Q76G19 769 aaPredicted RBP18.88■□□□□ 0.61
COL27A1-201ENST00000356083 TECP42680 631 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 CFAP221Q4G0U5 840 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 FAM149B1Q96BN6 582 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 GPC4O75487 556 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 PTPREP23469 700 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 TTC38Q5R3I4 469 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 USP40Q9NVE5 1235 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 ABCC11Q96J66 1382 aa18.88■□□□□ 0.61
COL27A1-201ENST00000356083 PPM1KQ8N3J5 372 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 TRAIPQ9BWF2 469 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 FAM8A1Q9UBU6 413 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 PMLP29590 882 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 ARHGDIAP52565 204 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 LRWD1Q9UFC0 647 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 P3H4Q92791 437 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 GTPBP10A4D1E9 387 aaKnown RBP18.87■□□□□ 0.61
COL27A1-201ENST00000356083 CCDC85BQ15834 202 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-201ENST00000356083 YIPF2Q9BWQ6 316 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 EPS15L1Q9UBC2 864 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 KCNH3Q9ULD8 1083 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 BUB1O43683 1085 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 DEXIO95424 95 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 STAT1P42224 750 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 AS3MTQ9HBK9 375 aa18.87■□□□□ 0.61
COL27A1-201ENST00000356083 FAF1Q9UNN5 650 aaPredicted RBP18.87■□□□□ 0.61
COL27A1-201ENST00000356083 MAGEA1P43355 309 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 KLHL40Q2TBA0 621 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 MAP3K21Q5TCX8 1036 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 EXT2Q93063 718 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 CARD6Q9BX69 1037 aa18.86■□□□□ 0.61
COL27A1-201ENST00000356083 RAB17Q9H0T7 212 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms