RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 ZSCAN23Q3MJ62 389 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 PRR16Q569H4 304 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 ZNF449Q6P9G9 518 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 BLIDQ8IZY5 108 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 ZNF713Q8N859 430 aaPredicted RBP12.46□□□□□ -0.41
FN1-204ENST00000356005 ANAPC4Q9UJX5 808 aa12.46□□□□□ -0.41
FN1-204ENST00000356005 FAM178BQ8IXR5 827 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 LRRC47Q8N1G4 583 aaKnown RBP12.46□□□□□ -0.42
FN1-204ENST00000356005 CERKQ8TCT0 537 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 GPR108Q9NPR9 543 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 UTP11Q9Y3A2 253 aaKnown RBP12.46□□□□□ -0.42
FN1-204ENST00000356005 KIF20BQ96Q89 1820 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 ABL1P00519 1130 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 IVLP07476 585 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 PSMC4P43686 418 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 SLC12A6Q9UHW9 1150 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 FAM184BQ9ULE4 1060 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 XRCC5P13010 732 aaKnown RBP12.46□□□□□ -0.42
FN1-204ENST00000356005 VAV2P52735 878 aa12.46□□□□□ -0.42
FN1-204ENST00000356005 PHLPP2Q6ZVD8 1323 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 KRT10P13645 584 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 NFKBIAP25963 317 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 DIS3L2Q8IYB7 885 aaKnown RBP12.45□□□□□ -0.42
FN1-204ENST00000356005 CLRN2A0PK11 232 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 E7EWF7 191 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 SGSM2O43147 1006 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 MXRA7P84157 204 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 AOC3Q16853 763 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 PLA2G4DQ86XP0 818 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 SLC7A3Q8WY07 619 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 GTF3C6Q969F1 213 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 ZNF274Q96GC6 653 aaPredicted RBP12.45□□□□□ -0.42
FN1-204ENST00000356005 GREM2Q9H772 168 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 MAGEF1Q9HAY2 307 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 UNC13BO14795 1591 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 FAM47AQ5JRC9 791 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 RC3H1Q5TC82 1133 aaKnown RBP12.45□□□□□ -0.42
FN1-204ENST00000356005 LGSNQ5TDP6 509 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 NEK8Q86SG6 692 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 KLHDC4Q8TBB5 520 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 MMS19Q96T76 1030 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 USP26Q9BXU7 913 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 DBNDD1Q9H9R9 158 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 ARFGAP3Q9NP61 516 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 MKRN1Q9UHC7 482 aaKnown RBP12.45□□□□□ -0.42
FN1-204ENST00000356005 IPO11Q9UI26 975 aaKnown RBP12.45□□□□□ -0.42
FN1-204ENST00000356005 TMEM232C9JQI7 657 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 KCNH4Q9UQ05 1017 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 COL4A3BPQ9Y5P4 624 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 SSH2Q76I76 1423 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 F8W8V4 182 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 RPS6KA4O75676 772 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 BRINP3Q76B58 766 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 NACC1Q96RE7 527 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 WDR11Q9BZH6 1224 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 SUGCTQ9HAC7 445 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 PTCH1Q13635 1447 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 ZWINTO95229 277 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 ANKRD36BP1Q96IX9 119 aa12.45□□□□□ -0.42
FN1-204ENST00000356005 LRRIQ4A6NIV6 560 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 TMEM191BP0C7N4 346 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 HOXA7P31268 230 aaPredicted RBP12.44□□□□□ -0.42
FN1-204ENST00000356005 IL17REQ8NFR9 667 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 C1orf112Q9NSG2 853 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 SEPT9Q9UHD8 586 aaPredicted RBP12.44□□□□□ -0.42
FN1-204ENST00000356005 CLTCL1P53675 1640 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 POLA2Q14181 598 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 ATP2A3Q93084 1043 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 IFT122Q9HBG6 1241 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 HOXC10Q9NYD6 342 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 LRCH2Q5VUJ6 765 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 NUB1Q9Y5A7 615 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 ZMYM6O95789 1325 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 STX17P56962 302 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 TUBB2AQ13885 445 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 CYP26C1Q6V0L0 522 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 NLRP10Q86W26 655 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 FOXP4Q8IVH2 680 aaPredicted RBP12.44□□□□□ -0.42
FN1-204ENST00000356005 CCDC89Q8N998 374 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 TUBB2BQ9BVA1 445 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 TMX1Q9H3N1 280 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 KAT6AQ92794 2004 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 ALKQ9UM73 1620 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.44□□□□□ -0.42
FN1-204ENST00000356005 BMP3P12645 472 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 GCFC2P16383 781 aaKnown RBP12.44□□□□□ -0.42
FN1-204ENST00000356005 HSP90AA4PQ58FG1 418 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 BBS5Q8N3I7 341 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 PPANQ9NQ55 473 aaKnown RBP12.44□□□□□ -0.42
FN1-204ENST00000356005 BSDC1Q9NW68 430 aaPredicted RBP12.44□□□□□ -0.42
FN1-204ENST00000356005 ZNF365Q70YC5 407 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 SDR42E1Q8WUS8 393 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 FAM227BQ96M60 508 aa12.44□□□□□ -0.42
FN1-204ENST00000356005 POMGNT1Q8WZA1 660 aa12.43□□□□□ -0.42
FN1-204ENST00000356005 ZBED2Q9BTP6 218 aa12.43□□□□□ -0.42
FN1-204ENST00000356005 TRIM50Q86XT4 487 aa12.43□□□□□ -0.42
FN1-204ENST00000356005 FASTKD5Q7L8L6 764 aaKnown RBP12.43□□□□□ -0.42
FN1-204ENST00000356005 CCDC110Q8TBZ0 833 aa12.43□□□□□ -0.42
FN1-204ENST00000356005 FBXO40Q9UH90 709 aa12.43□□□□□ -0.42
FN1-204ENST00000356005 SKILP12757 684 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms