RNA–Protein interactions for RNA: ENST00000355983.3

CCR9-201, Transcript of C-C motif chemokine receptor 9, humanhuman

TSL 1 (best) BASIC

Gene CCR9, Length 2,653 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCR9-201ENST00000355983 CDC37Q16543 378 aaPredicted RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 GKAP1Q5VSY0 366 aaPredicted RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 NCAPG2Q86XI2 1143 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 SPATA4Q8NEY3 305 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 ATL2Q8NHH9 583 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 FAM81AQ8TBF8 368 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 PIK3R5Q8WYR1 880 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 TSC22D3Q99576 134 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 NCOA5Q9HCD5 579 aaKnown RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 MIS18AQ9NYP9 233 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 HDAC6Q9UBN7 1215 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 ZRANB1Q9UGI0 708 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 ANAPC4Q9UJX5 808 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 SETD1BQ9UPS6 1966 aaKnown RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 GPR75-ASB3A0A0A6YYF3 556 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 SPDYE3A6NKU9 549 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 CCT8L1PA6NM43 557 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 E7ENQ6 273 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 E7EWF7 191 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 CYLC1P35663 651 aaPredicted RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 ATP1A2P50993 1020 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 FOSBP53539 338 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 DYNC1I2Q13409 638 aaKnown RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 TAF7Q15545 349 aaPredicted RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 CCDC122Q5T0U0 273 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 HAUS3Q68CZ6 603 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 ARHGAP22Q7Z5H3 698 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 TBC1D31Q96DN5 1066 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 GDAP1L1Q96MZ0 367 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 LRRC1Q9BTT6 524 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 TAF1DQ9H5J8 278 aaPredicted RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 CWC25Q9NXE8 425 aaPredicted RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 DMGDHQ9UI17 866 aaKnown RBP8.56□□□□□ -1.04
CCR9-201ENST00000355983 ASB3Q9Y575 518 aa8.56□□□□□ -1.04
CCR9-201ENST00000355983 RIMS1Q86UR5 1692 aaKnown RBP8.55□□□□□ -1.04
CCR9-201ENST00000355983 RASSF10A6NK89 507 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 ENO4A6NNW6 628 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 ZMYND10O75800 440 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 PTPREP23469 700 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 MARCKSP29966 332 aaPredicted RBP8.55□□□□□ -1.04
CCR9-201ENST00000355983 PEX19P40855 299 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 RBM5P52756 815 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCR9-201ENST00000355983 SEC24CP53992 1094 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 MRPS35P82673 323 aaKnown RBP8.55□□□□□ -1.04
CCR9-201ENST00000355983 HDGFL1Q5TGJ6 251 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 CCDC181Q5TID7 509 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 RUFY4Q6ZNE9 571 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 APBB1IPQ7Z5R6 666 aaPredicted RBP8.55□□□□□ -1.04
CCR9-201ENST00000355983 SH2D3CQ8N5H7 860 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 CCDC63Q8NA47 563 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 AIDAQ96BJ3 306 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 IQCDQ96DY2 449 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 GSDMAQ96QA5 445 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 BOLA2Q9H3K6 86 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 CNOT10Q9H9A5 744 aaKnown RBP8.55□□□□□ -1.04
CCR9-201ENST00000355983 ZNHIT6Q9NWK9 470 aaKnown RBP8.55□□□□□ -1.04
CCR9-201ENST00000355983 TSKSQ9UJT2 592 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 IGSF1Q8N6C5 1336 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 LMTK3Q96Q04 1460 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 TOPAZ1Q8N9V7 1692 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 GOLGA6L10A6NI86 522 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 ASAP2O43150 1006 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 ACTN4O43707 911 aaKnown RBP8.55□□□□□ -1.04
CCR9-201ENST00000355983 ORC4O43929 436 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 TRIM37O94972 964 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 ATP4AP20648 1035 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 KRT9P35527 623 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 C2orf54Q08AI8 447 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 IMMTQ16891 758 aaKnown RBP8.55□□□□□ -1.04
CCR9-201ENST00000355983 ZMYM1Q5SVZ6 1142 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 C1QTNF12Q5T7M4 302 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 THEMIS2Q5TEJ8 643 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 CCDC129Q6ZRS4 1044 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 MAATS1Q7Z4T9 603 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 NUP133Q8WUM0 1156 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 CPLX3Q8WVH0 158 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 HAUS7Q99871 368 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.55□□□□□ -1.04
CCR9-201ENST00000355983 CAPN11Q9UMQ6 739 aa8.55□□□□□ -1.04
CCR9-201ENST00000355983 ENC1O14682 589 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 FLOT1O75955 427 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 NPM1P06748 294 aaKnown RBP eCLIP8.54□□□□□ -1.04
CCR9-201ENST00000355983 SPRED3Q2MJR0 410 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 HIBCHQ6NVY1 386 aaPredicted RBP8.54□□□□□ -1.04
CCR9-201ENST00000355983 SH3RF1Q7Z6J0 888 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 VPS37DQ86XT2 251 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 RETREG2Q8NC44 543 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 CCDC43Q96MW1 224 aaKnown RBP8.54□□□□□ -1.04
CCR9-201ENST00000355983 NUP88Q99567 741 aaPredicted RBP8.54□□□□□ -1.04
CCR9-201ENST00000355983 GORASP1Q9BQQ3 440 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 LRRC2Q9BYS8 371 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 BAIAP2L1Q9UHR4 511 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 HYOU1Q9Y4L1 999 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 MAP3K19Q56UN5 1328 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 GNAT3A8MTJ3 354 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 OPLAHO14841 1288 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 SRGAP2O75044 1071 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 RNF8O76064 485 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 KRT14P02533 472 aa8.54□□□□□ -1.04
CCR9-201ENST00000355983 SSBP05455 408 aaKnown RBP eCLIP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms