RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 OLFML2BQ68BL8 750 aa19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 ANKLE1Q8NAG6 615 aa19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 KIFC2Q96AC6 838 aa19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 HTATIP2Q9BUP3 242 aa19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 RAVER2Q9HCJ3 691 aaKnown RBP19.86■□□□□ 0.77
PDLIM7-201ENST00000355572 ZMYM6O95789 1325 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 TSPY2A6NKD2 308 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 ORC4O43929 436 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 SNAP25P60880 206 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 ZNF792Q3KQV3 632 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 SNRNP48Q6IEG0 339 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 NECAB2Q7Z6G3 386 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 CPXCR1Q8N123 301 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 MMP19Q99542 508 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 ZNF287Q9HBT7 754 aa19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 DDX20Q9UHI6 824 aaKnown RBP19.85■□□□□ 0.77
PDLIM7-201ENST00000355572 ZNF536O15090 1300 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 NEDD4P46934 1319 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 RANBP6O60518 1105 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 SLC25A27O95847 323 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 MCCP23508 829 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 RRP12Q5JTH9 1297 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 CWC27Q6UX04 472 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 CHRDL2Q6WN34 429 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 KCTD1Q719H9 257 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 ABRAQ8N0Z2 381 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 PRPF38AQ8NAV1 312 aaKnown RBP19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 FGD4Q96M96 766 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 PRO3102Q9H379 93 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 C11orf49Q9H6J7 331 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 SLC38A10Q9HBR0 1119 aa19.84■□□□□ 0.77
PDLIM7-201ENST00000355572 TMEM232C9JQI7 657 aa19.83■□□□□ 0.77
PDLIM7-201ENST00000355572 SLC3A2P08195 630 aaKnown RBP19.83■□□□□ 0.77
PDLIM7-201ENST00000355572 FCER1AP12319 257 aa19.83■□□□□ 0.77
PDLIM7-201ENST00000355572 BMP3P12645 472 aa19.83■□□□□ 0.77
PDLIM7-201ENST00000355572 CNGA1P29973 690 aa19.83■□□□□ 0.77
PDLIM7-201ENST00000355572 SLC4A3P48751 1232 aa19.83■□□□□ 0.77
PDLIM7-201ENST00000355572 STX8Q9UNK0 236 aa19.83■□□□□ 0.77
PDLIM7-201ENST00000355572 MTMR7Q9Y216 660 aa19.83■□□□□ 0.77
PDLIM7-201ENST00000355572 ATP2A1O14983 1001 aa19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 LRRC26Q2I0M4 334 aa19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 TTBK2Q6IQ55 1244 aa19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 RCSD1Q6JBY9 416 aa19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 C7orf61Q8IZ16 206 aa19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 LENG1Q96BZ8 264 aaPredicted RBP19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 TEX13BQ9BXU2 312 aa19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 RBM27Q9P2N5 1060 aaKnown RBP19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 FEM1BQ9UK73 627 aa19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 SYNPO2Q9UMS6 1093 aa19.82■□□□□ 0.76
PDLIM7-201ENST00000355572 DNAJC25-GNG10A0A024R161 153 aa19.81■□□□□ 0.76
PDLIM7-201ENST00000355572 EVI5O60447 810 aa19.81■□□□□ 0.76
PDLIM7-201ENST00000355572 TTC22Q5TAA0 569 aa19.81■□□□□ 0.76
PDLIM7-201ENST00000355572 GMCL1Q96IK5 515 aa19.81■□□□□ 0.76
PDLIM7-201ENST00000355572 TOMM22Q9NS69 142 aa19.81■□□□□ 0.76
PDLIM7-201ENST00000355572 ZMYND8Q9ULU4 1186 aaPredicted RBP19.81■□□□□ 0.76
PDLIM7-201ENST00000355572 TRIOBPQ9H2D6 2365 aa19.81■□□□□ 0.76
PDLIM7-201ENST00000355572 LTBP2Q14767 1821 aa19.81■□□□□ 0.76
PDLIM7-201ENST00000355572 SYN1P17600 705 aa19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 FXR1P51114 621 aaKnown RBP eCLIP19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 GJC2Q5T442 439 aaPredicted RBP19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 SKAP1Q86WV1 359 aa19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 TICAM2Q86XR7 235 aa19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 STAG1Q8WVM7 1258 aa19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 AGBL1Q96MI9 1066 aa19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 TMEM47Q9BQJ4 181 aa19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 DDX49Q9Y6V7 483 aaKnown RBP19.8■□□□□ 0.76
PDLIM7-201ENST00000355572 CAPN2P17655 700 aa19.79■□□□□ 0.76
PDLIM7-201ENST00000355572 SLC1A4P43007 532 aa19.79■□□□□ 0.76
PDLIM7-201ENST00000355572 KCTD2Q14681 263 aa19.79■□□□□ 0.76
PDLIM7-201ENST00000355572 AKNAD1Q5T1N1 836 aa19.79■□□□□ 0.76
PDLIM7-201ENST00000355572 ZKSCAN3Q9BRR0 538 aa19.79■□□□□ 0.76
PDLIM7-201ENST00000355572 DIAPH3Q9NSV4 1193 aa19.79■□□□□ 0.76
PDLIM7-201ENST00000355572 SEPT4O43236 478 aa19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 ZBED4O75132 1171 aa19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 SNAI1O95863 264 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 ZNF865P0CJ78 1059 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 SLC16A2P36021 539 aa19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 STAT2P52630 851 aa19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 IRX5P78411 483 aaPredicted RBP19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 TINF2Q9BSI4 451 aa19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 HOMER2Q9NSB8 354 aa19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 PRR12Q9ULL5 1215 aa19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 ISY1Q9ULR0 285 aaKnown RBP19.78■□□□□ 0.76
PDLIM7-201ENST00000355572 ASTN1O14525 1302 aa19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 FRMPD2Q68DX3 1309 aaPredicted RBP19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 MYH6P13533 1939 aa19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 ADCY6O43306 1168 aa19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 CNTN2Q02246 1040 aa19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 MUM1L1Q5H9M0 696 aa19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 TCP11L1Q9NUJ3 509 aa19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 NR2E3Q9Y5X4 410 aa19.77■□□□□ 0.76
PDLIM7-201ENST00000355572 CCDC174Q6PII3 467 aa19.76■□□□□ 0.75
PDLIM7-201ENST00000355572 SENP6Q9GZR1 1112 aaPredicted RBP19.76■□□□□ 0.75
PDLIM7-201ENST00000355572 GPCPD1Q9NPB8 672 aa19.76■□□□□ 0.75
PDLIM7-201ENST00000355572 DIS3Q9Y2L1 958 aaKnown RBP19.76■□□□□ 0.75
PDLIM7-201ENST00000355572 TAF6LQ9Y6J9 622 aa19.76■□□□□ 0.75
PDLIM7-201ENST00000355572 PLA2G6O60733 806 aa19.75■□□□□ 0.75
PDLIM7-201ENST00000355572 COPB2P35606 906 aa19.75■□□□□ 0.75
PDLIM7-201ENST00000355572 ATN1P54259 1190 aaPredicted RBP19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms