RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 ADAMTS3O15072 1205 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 PLA2G6O60733 806 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 SYKP43405 635 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 PRELPP51888 382 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 STX1AQ16623 288 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 RBM26Q5T8P6 1007 aaKnown RBP19.69■□□□□ 0.74
VPS13B-201ENST00000355155 SASS6Q6UVJ0 657 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 KIAA1468Q9P260 1216 aa19.69■□□□□ 0.74
VPS13B-201ENST00000355155 WNT10BO00744 389 aa19.68■□□□□ 0.74
VPS13B-201ENST00000355155 PRPHP41219 470 aa19.68■□□□□ 0.74
VPS13B-201ENST00000355155 RRP1BQ14684 758 aaKnown RBP19.68■□□□□ 0.74
VPS13B-201ENST00000355155 RASGRP2Q7LDG7 609 aa19.68■□□□□ 0.74
VPS13B-201ENST00000355155 PIGSQ96S52 555 aa19.68■□□□□ 0.74
VPS13B-201ENST00000355155 CLK2P49760 499 aaKnown RBP19.68■□□□□ 0.74
VPS13B-201ENST00000355155 GLT8D2Q9H1C3 349 aa19.68■□□□□ 0.74
VPS13B-201ENST00000355155 WNT7AO00755 349 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 MYO1BO43795 1136 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 MDM2Q00987 491 aaPredicted RBP19.67■□□□□ 0.74
VPS13B-201ENST00000355155 ICA1Q05084 483 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 ZSCAN29Q8IWY8 852 aaPredicted RBP19.67■□□□□ 0.74
VPS13B-201ENST00000355155 ADGRF4Q8IZF3 695 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 ANP32BQ92688 251 aaKnown RBP19.67■□□□□ 0.74
VPS13B-201ENST00000355155 FAM13BQ9NYF5 915 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 KCNH3Q9ULD8 1083 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 SEPT2Q15019 361 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 NOM1Q5C9Z4 860 aaKnown RBP19.67■□□□□ 0.74
VPS13B-201ENST00000355155 NT5DC1Q5TFE4 455 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 HEATR3Q7Z4Q2 680 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 CLIC6Q96NY7 704 aa19.67■□□□□ 0.74
VPS13B-201ENST00000355155 PYM1Q9BRP8 204 aaKnown RBP19.67■□□□□ 0.74
VPS13B-201ENST00000355155 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.67■□□□□ 0.74
VPS13B-201ENST00000355155 JAG1P78504 1218 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 KRBA2Q6ZNG9 492 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 PIK3AP1Q6ZUJ8 805 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 ZBTB5O15062 677 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 CKAP2LQ8IYA6 745 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 RIC8AQ9NPQ8 531 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 ANO10Q9NW15 660 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 MPHOSPH10O00566 681 aaKnown RBP19.66■□□□□ 0.74
VPS13B-201ENST00000355155 TNNI2P48788 182 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 NAPAP54920 295 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 SLFN13Q68D06 897 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 CLEC10AQ8IUN9 316 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 TMX2Q9Y320 296 aa19.66■□□□□ 0.74
VPS13B-201ENST00000355155 FRMPD2Q68DX3 1309 aaPredicted RBP19.65■□□□□ 0.74
VPS13B-201ENST00000355155 KANK3Q6NY19 840 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 SMCO2A6NFE2 343 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 TCP10L2B9ZVM9 353 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 IQCB1Q15051 598 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 MCTP2Q6DN12 878 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 SH3RF1Q7Z6J0 888 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 SPATA20Q8TB22 786 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 TEPSINQ96N21 525 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 CSRNP2Q9H175 543 aa19.65■□□□□ 0.74
VPS13B-201ENST00000355155 DOCK1Q14185 1865 aa19.64■□□□□ 0.74
VPS13B-201ENST00000355155 SLURP2P0DP57 97 aa19.64■□□□□ 0.73
VPS13B-201ENST00000355155 LONP1P36776 959 aaKnown RBP19.64■□□□□ 0.73
VPS13B-201ENST00000355155 GRIN1Q05586 938 aa19.64■□□□□ 0.73
VPS13B-201ENST00000355155 ANO6Q4KMQ2 910 aa19.64■□□□□ 0.73
VPS13B-201ENST00000355155 UBA5Q9GZZ9 404 aa19.64■□□□□ 0.73
VPS13B-201ENST00000355155 BAZ2BQ9UIF8 2168 aaKnown RBP19.64■□□□□ 0.73
VPS13B-201ENST00000355155 CCDC194A0A1B0GVG4 234 aa19.64■□□□□ 0.73
VPS13B-201ENST00000355155 PPP1R11O60927 126 aaPredicted RBP19.64■□□□□ 0.73
VPS13B-201ENST00000355155 TNFAIP1Q13829 316 aa19.64■□□□□ 0.73
VPS13B-201ENST00000355155 CBX8Q9HC52 389 aa19.64■□□□□ 0.73
VPS13B-201ENST00000355155 BCS1LQ9Y276 419 aa19.64■□□□□ 0.73
VPS13B-201ENST00000355155 CLRN2A0PK11 232 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 FAM196BA6NMK8 535 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 F5H6K3 240 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 ACTN4O43707 911 aaKnown RBP19.63■□□□□ 0.73
VPS13B-201ENST00000355155 GH2P01242 217 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 EIF6P56537 245 aaKnown RBP19.63■□□□□ 0.73
VPS13B-201ENST00000355155 KLRC3Q07444 240 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 PTGDRQ13258 359 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 ZBTB21Q9ULJ3 1066 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 SARSP49591 514 aaKnown RBP19.63■□□□□ 0.73
VPS13B-201ENST00000355155 NLRP12P59046 1061 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 NONOQ15233 471 aaKnown RBP eCLIP19.63■□□□□ 0.73
VPS13B-201ENST00000355155 PAPPA2Q9BXP8 1791 aa19.63■□□□□ 0.73
VPS13B-201ENST00000355155 SHROOM1Q2M3G4 852 aaPredicted RBP19.62■□□□□ 0.73
VPS13B-201ENST00000355155 SDF4Q9BRK5 362 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 CPVLQ9H3G5 476 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 ARHGEF10LQ9HCE6 1279 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 GPCPD1Q9NPB8 672 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 PHF20L1A8MW92 1017 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 NDUFB10O96000 172 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 CAP2P40123 477 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 TTBK2Q6IQ55 1244 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 RNF214Q8ND24 703 aa19.62■□□□□ 0.73
VPS13B-201ENST00000355155 ADCY7P51828 1080 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 ZNF174Q15697 407 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 IL17AQ16552 155 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 NBPF9Q3BBW0 867 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 LONRF3Q496Y0 759 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 HOOK1Q9UJC3 728 aaKnown RBP19.61■□□□□ 0.73
VPS13B-201ENST00000355155 GDF11O95390 407 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 SLC1A4P43007 532 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 RASSF7Q02833 373 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 SARM1Q6SZW1 724 aa19.61■□□□□ 0.73
VPS13B-201ENST00000355155 NLGN2Q8NFZ4 835 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms