RNA–Protein interactions for RNA: ENST00000355119.8

LIMS2-202, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,045 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-202ENST00000355119 CCDC12Q8WUD4 166 aaPredicted RBP24.66■■□□□ 1.54
LIMS2-202ENST00000355119 STAMQ92783 540 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 CRAMP1Q96RY5 1269 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 BLZF1Q9H2G9 400 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 CTNND2Q9UQB3 1225 aa24.66■■□□□ 1.54
LIMS2-202ENST00000355119 BAZ2BQ9UIF8 2168 aaKnown RBP24.65■■□□□ 1.54
LIMS2-202ENST00000355119 KLRF2D3W0D1 207 aa24.65■■□□□ 1.54
LIMS2-202ENST00000355119 SLC27A3Q5K4L6 730 aa24.65■■□□□ 1.54
LIMS2-202ENST00000355119 RRAGBQ5VZM2 374 aa24.65■■□□□ 1.54
LIMS2-202ENST00000355119 SMYD4Q8IYR2 804 aaPredicted RBP24.65■■□□□ 1.54
LIMS2-202ENST00000355119 TBC1D16Q8TBP0 767 aa24.65■■□□□ 1.54
LIMS2-202ENST00000355119 ADD3Q9UEY8 706 aaKnown RBP24.65■■□□□ 1.54
LIMS2-202ENST00000355119 RWDD2AQ9UIY3 292 aa24.65■■□□□ 1.54
LIMS2-202ENST00000355119 PPP2R2CQ9Y2T4 447 aa24.65■■□□□ 1.54
LIMS2-202ENST00000355119 PARP1P09874 1014 aaKnown RBP24.64■■□□□ 1.54
LIMS2-202ENST00000355119 SMARCA1P28370 1054 aa24.64■■□□□ 1.54
LIMS2-202ENST00000355119 STAT6P42226 847 aa24.64■■□□□ 1.54
LIMS2-202ENST00000355119 MFSD14BQ5SR56 506 aa24.64■■□□□ 1.54
LIMS2-202ENST00000355119 ZNF658Q5TYW1 1059 aaPredicted RBP24.64■■□□□ 1.54
LIMS2-202ENST00000355119 TMC4Q7Z404 712 aa24.64■■□□□ 1.54
LIMS2-202ENST00000355119 PANX2Q96RD6 677 aa24.64■■□□□ 1.54
LIMS2-202ENST00000355119 ARID3AQ99856 593 aa24.64■■□□□ 1.54
LIMS2-202ENST00000355119 AFF2P51816 1311 aa24.64■■□□□ 1.54
LIMS2-202ENST00000355119 AKR1B15C9JRZ8 316 aaPredicted RBP24.64■■□□□ 1.53
LIMS2-202ENST00000355119 RPN1P04843 607 aaKnown RBP24.64■■□□□ 1.53
LIMS2-202ENST00000355119 RHBDL3P58872 404 aa24.64■■□□□ 1.53
LIMS2-202ENST00000355119 NAA30Q147X3 362 aaPredicted RBP24.64■■□□□ 1.53
LIMS2-202ENST00000355119 CCDC93Q567U6 631 aa24.64■■□□□ 1.53
LIMS2-202ENST00000355119 MTRQ99707 1265 aa24.64■■□□□ 1.53
LIMS2-202ENST00000355119 PRPHP41219 470 aa24.63■■□□□ 1.53
LIMS2-202ENST00000355119 ADKP55263 362 aaKnown RBP24.63■■□□□ 1.53
LIMS2-202ENST00000355119 TRIM65Q6PJ69 517 aa24.63■■□□□ 1.53
LIMS2-202ENST00000355119 PPFIBP1Q86W92 1011 aa24.63■■□□□ 1.53
LIMS2-202ENST00000355119 DISC1Q9NRI5 854 aa24.63■■□□□ 1.53
LIMS2-202ENST00000355119 POLLQ9UGP5 575 aa24.63■■□□□ 1.53
LIMS2-202ENST00000355119 MTMR7Q9Y216 660 aa24.63■■□□□ 1.53
LIMS2-202ENST00000355119 PBX1P40424 430 aa24.62■■□□□ 1.53
LIMS2-202ENST00000355119 KRT25Q7Z3Z0 450 aa24.62■■□□□ 1.53
LIMS2-202ENST00000355119 ZMYND12Q9H0C1 365 aa24.62■■□□□ 1.53
LIMS2-202ENST00000355119 DNAI1Q9UI46 699 aa24.62■■□□□ 1.53
LIMS2-202ENST00000355119 TRPC5Q9UL62 973 aaPredicted RBP24.62■■□□□ 1.53
LIMS2-202ENST00000355119 SPAG1Q07617 926 aa24.62■■□□□ 1.53
LIMS2-202ENST00000355119 PAK1Q13153 545 aa24.62■■□□□ 1.53
LIMS2-202ENST00000355119 INF2Q27J81 1249 aa24.62■■□□□ 1.53
LIMS2-202ENST00000355119 RRP36Q96EU6 259 aaKnown RBP24.62■■□□□ 1.53
LIMS2-202ENST00000355119 CCSER1Q9C0I3 900 aa24.62■■□□□ 1.53
LIMS2-202ENST00000355119 LRRC37AA6NMS7 1700 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 TEX33O43247 280 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 SEMA3FQ13275 785 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 KARSQ15046 597 aaKnown RBP24.61■■□□□ 1.53
LIMS2-202ENST00000355119 IGSF22Q8N9C0 903 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 NAA15Q9BXJ9 866 aaKnown RBP24.61■■□□□ 1.53
LIMS2-202ENST00000355119 C6orf50Q9HD87 102 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 LIMA1Q9UHB6 759 aaKnown RBP24.61■■□□□ 1.53
LIMS2-202ENST00000355119 C6orf229H3BNL8 230 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 MYL1P05976 194 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 GOLGA8HP0CJ92 632 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 NOVP48745 357 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 NAPAP54920 295 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 TMEM60Q9H2L4 133 aa24.61■■□□□ 1.53
LIMS2-202ENST00000355119 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP24.61■■□□□ 1.53
LIMS2-202ENST00000355119 MYH1P12882 1939 aa24.6■■□□□ 1.53
LIMS2-202ENST00000355119 ITIH6Q6UXX5 1313 aa24.6■■□□□ 1.53
LIMS2-202ENST00000355119 KLRG2A4D1S0 409 aaPredicted RBP24.6■■□□□ 1.53
LIMS2-202ENST00000355119 GNA11P29992 359 aa24.6■■□□□ 1.53
LIMS2-202ENST00000355119 ANKRD20A12PQ8NF67 263 aa24.6■■□□□ 1.53
LIMS2-202ENST00000355119 FEZ1Q99689 392 aa24.6■■□□□ 1.53
LIMS2-202ENST00000355119 UBA7P41226 1012 aa24.59■■□□□ 1.53
LIMS2-202ENST00000355119 DDR1Q08345 913 aa24.59■■□□□ 1.53
LIMS2-202ENST00000355119 ZNF397Q8NF99 534 aaPredicted RBP24.59■■□□□ 1.53
LIMS2-202ENST00000355119 NELFBQ8WX92 580 aa24.59■■□□□ 1.53
LIMS2-202ENST00000355119 SEC63Q9UGP8 760 aaKnown RBP24.59■■□□□ 1.53
LIMS2-202ENST00000355119 LTBP1Q14766 1721 aa24.59■■□□□ 1.53
LIMS2-202ENST00000355119 NONOQ15233 471 aaKnown RBP eCLIP24.59■■□□□ 1.53
LIMS2-202ENST00000355119 SOGA3Q5TF21 947 aa24.59■■□□□ 1.53
LIMS2-202ENST00000355119 SP8Q8IXZ3 490 aa24.59■■□□□ 1.53
LIMS2-202ENST00000355119 RASSF8Q8NHQ8 419 aa24.59■■□□□ 1.53
LIMS2-202ENST00000355119 SUGT1Q9Y2Z0 365 aa24.59■■□□□ 1.53
LIMS2-202ENST00000355119 FOCADQ5VW36 1801 aa24.58■■□□□ 1.53
LIMS2-202ENST00000355119 LRRC10BA6NIK2 292 aa24.58■■□□□ 1.53
LIMS2-202ENST00000355119 POLRMTO00411 1230 aaKnown RBP24.58■■□□□ 1.53
LIMS2-202ENST00000355119 KCNB1Q14721 858 aa24.58■■□□□ 1.53
LIMS2-202ENST00000355119 CCDC51Q96ER9 411 aa24.58■■□□□ 1.53
LIMS2-202ENST00000355119 CEP95Q96GE4 821 aa24.58■■□□□ 1.53
LIMS2-202ENST00000355119 AK8Q96MA6 479 aa24.58■■□□□ 1.53
LIMS2-202ENST00000355119 SRRTQ9BXP5 876 aaKnown RBP24.58■■□□□ 1.53
LIMS2-202ENST00000355119 MAGEF1Q9HAY2 307 aa24.58■■□□□ 1.53
LIMS2-202ENST00000355119 PLIN4Q96Q06 1357 aa24.58■■□□□ 1.53
LIMS2-202ENST00000355119 SMCO2A6NFE2 343 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 PPEF1O14829 653 aaPredicted RBP24.57■■□□□ 1.52
LIMS2-202ENST00000355119 TPM1P09493 284 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 CDC25AP30304 524 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 RBL2Q08999 1139 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 USP17L2Q6R6M4 530 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 TOGARAM2Q6ZUX3 1019 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 CUEDC2Q9H467 287 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 DAGLAQ9Y4D2 1042 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 hCG_1984214I3L0E3 225 aa24.57■■□□□ 1.52
LIMS2-202ENST00000355119 ORC2Q13416 577 aaPredicted RBP24.57■■□□□ 1.52
LIMS2-202ENST00000355119 KRT31Q15323 416 aa24.57■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms