RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 FAM47AQ5JRC9 791 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 INTS5Q6P9B9 1019 aaKnown RBP10.53□□□□□ -0.72
SMG6-202ENST00000354901 C3orf67Q6ZVT6 689 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 OTUD6BQ8N6M0 293 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 FAM71BQ8TC56 605 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 SHISA4Q96DD7 197 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 TEX33O43247 280 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 GCKP35557 465 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 PIP4K2BP78356 416 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 MDM2Q00987 491 aaPredicted RBP10.53□□□□□ -0.72
SMG6-202ENST00000354901 SF3A3Q12874 501 aaKnown RBP eCLIP10.53□□□□□ -0.72
SMG6-202ENST00000354901 ITPK1Q13572 414 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 ENAHQ8N8S7 591 aaPredicted RBP10.53□□□□□ -0.72
SMG6-202ENST00000354901 IGSF22Q8N9C0 903 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 MED15Q96RN5 788 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 BLZF1Q9H2G9 400 aa10.53□□□□□ -0.72
SMG6-202ENST00000354901 STK36Q9NRP7 1315 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 LOC102724428A0A0B4J2F2 783 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 USP17L12C9JPN9 530 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 USP17L21D6R901 530 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 RGL2O15211 777 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 GNAT2P19087 354 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 CDC25AP30304 524 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 SIK1P57059 783 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 MAP3K9P80192 1104 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 NEDD9Q14511 834 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 FNBP4Q8N3X1 1017 aaPredicted RBP10.52□□□□□ -0.72
SMG6-202ENST00000354901 CRACR2AQ9BSW2 395 aa10.52□□□□□ -0.72
SMG6-202ENST00000354901 FOXP1Q9H334 677 aaPredicted RBP10.52□□□□□ -0.72
SMG6-202ENST00000354901 RSRC2Q7L4I2 434 aaKnown RBP10.52□□□□□ -0.73
SMG6-202ENST00000354901 SYMPKQ92797 1274 aaKnown RBP10.52□□□□□ -0.73
SMG6-202ENST00000354901 KAT14Q9H8E8 782 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 ANKZF1Q9H8Y5 726 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 TFCP2L1Q9NZI6 479 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 MAPK8IP1Q9UQF2 711 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 MAP2K7O14733 419 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 PPP1R12BO60237 982 aaPredicted RBP10.52□□□□□ -0.73
SMG6-202ENST00000354901 VEGFAP15692 232 aaPredicted RBP10.52□□□□□ -0.73
SMG6-202ENST00000354901 KLRK1P26718 216 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 GNGT1P63211 74 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 CATIPQ7Z7H3 387 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 CABS1Q96KC9 395 aa10.52□□□□□ -0.73
SMG6-202ENST00000354901 AATFQ9NY61 560 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMG6-202ENST00000354901 SRPRBQ9Y5M8 271 aaKnown RBP10.52□□□□□ -0.73
SMG6-202ENST00000354901 THSD7AQ9UPZ6 1657 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 NUP98P52948 1817 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 NUTM2BA6NNL0 878 aaPredicted RBP10.51□□□□□ -0.73
SMG6-202ENST00000354901 NUTM2EB1AL46 878 aaPredicted RBP10.51□□□□□ -0.73
SMG6-202ENST00000354901 ACTN4O43707 911 aaKnown RBP10.51□□□□□ -0.73
SMG6-202ENST00000354901 CAMTA2O94983 1202 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 XBP1P17861 261 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 CCT6AP40227 531 aaKnown RBP10.51□□□□□ -0.73
SMG6-202ENST00000354901 MRPS25P82663 173 aaKnown RBP10.51□□□□□ -0.73
SMG6-202ENST00000354901 ERFEQ4G0M1 354 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 SPECC1LQ69YQ0 1117 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 NUTM2AQ8IVF1 878 aaPredicted RBP10.51□□□□□ -0.73
SMG6-202ENST00000354901 TMTC2Q8N394 836 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 MIEF2Q96C03 454 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 ZSCAN10Q96SZ4 725 aaPredicted RBP10.51□□□□□ -0.73
SMG6-202ENST00000354901 EIF4E1BA6NMX2 242 aaKnown RBP10.51□□□□□ -0.73
SMG6-202ENST00000354901 ARHGAP6O43182 974 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 KCNQ2O43526 872 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 KRT2P35908 639 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 SRGAP1Q7Z6B7 1085 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 IQCA1Q86XH1 822 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 ANKRD18AQ8IVF6 992 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 MLKLQ8NB16 471 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 CAPZA3Q96KX2 299 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 IRAK4Q9NWZ3 460 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 CEP131Q9UPN4 1083 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 MYH3P11055 1940 aa10.51□□□□□ -0.73
SMG6-202ENST00000354901 FAM237AA0A1B0GTK4 181 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 SOWAHDA6NJG2 315 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 NDUFAB1O14561 156 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 NTSR2O95665 410 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CYP2D6P10635 497 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CD44P16070 742 aaKnown RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 GBP2P32456 591 aaPredicted RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 MCM7P33993 719 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 ATP1A2P50993 1020 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 MORC3Q14149 939 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 TC2NQ8N9U0 490 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 FAM76AQ8TAV0 307 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 MRPL44Q9H9J2 332 aaKnown RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 BCL9LQ86UU0 1499 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 MYH2Q9UKX2 1941 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CTAGE15A4D2H0 777 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CTAGE8P0CG41 777 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CDR1P51861 262 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 SEC23AQ15436 765 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 PKN1Q16512 942 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 NCAPH2Q6IBW4 605 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 PIK3AP1Q6ZUJ8 805 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CTAGE6Q86UF2 777 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 TMEM139Q8IV31 216 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CTAGE4Q8IX94 777 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 CDC5LQ99459 802 aaKnown RBP10.5□□□□□ -0.73
SMG6-202ENST00000354901 DACH1Q9UI36 760 aa10.5□□□□□ -0.73
SMG6-202ENST00000354901 L1RE1Q9UN81 338 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms