RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ADAMTS3O15072 1205 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 CYTH3O43739 400 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 CCDC93Q567U6 631 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 HEATR3Q7Z4Q2 680 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 PROM2Q8N271 834 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 SLC44A5Q8NCS7 719 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 PANX2Q96RD6 677 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 FEZ1Q99689 392 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 ADD3Q9UEY8 706 aaKnown RBP25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 RWDD2AQ9UIY3 292 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 PPP2R2CQ9Y2T4 447 aa25.19■■□□□ 1.62
NKX2-1-201ENST00000354822 AKR1B15C9JRZ8 316 aaPredicted RBP25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 KLRF2D3W0D1 207 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 MYL1P05976 194 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 STX17P56962 302 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 TYW1BQ6NUM6 668 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 PRPHP41219 470 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 GOLGA8FQ08AF8 430 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 GOLGA8DPQ0D2H9 430 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 ZNF658Q5TYW1 1059 aaPredicted RBP25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 RRAGBQ5VZM2 374 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 TRIM65Q6PJ69 517 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 TMC4Q7Z404 712 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 CRAMP1Q96RY5 1269 aa25.18■■□□□ 1.62
NKX2-1-201ENST00000354822 STAT6P42226 847 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 ADKP55263 362 aaKnown RBP25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 SPAG1Q07617 926 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 PTPN21Q16825 1174 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 MFSD14BQ5SR56 506 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 PPFIBP1Q86W92 1011 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 NAA15Q9BXJ9 866 aaKnown RBP25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 ZMYND12Q9H0C1 365 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 PARP1P09874 1014 aaKnown RBP25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 STAMQ92783 540 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 MTRQ99707 1265 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 BLZF1Q9H2G9 400 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 DISC1Q9NRI5 854 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 DNAI1Q9UI46 699 aa25.17■■□□□ 1.62
NKX2-1-201ENST00000354822 GAKO14976 1311 aa25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 FLT1P17948 1338 aa25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 KLRG2A4D1S0 409 aaPredicted RBP25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 LRRC10BA6NIK2 292 aa25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 SLC35G1Q2M3R5 365 aa25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 SMYD4Q8IYR2 804 aaPredicted RBP25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 TBC1D16Q8TBP0 767 aa25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 RASGRP4Q8TDF6 673 aa25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 SRRTQ9BXP5 876 aaKnown RBP25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 CCSER1Q9C0I3 900 aa25.16■■□□□ 1.62
NKX2-1-201ENST00000354822 RPN1P04843 607 aaKnown RBP25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 GNA11P29992 359 aa25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 PBX1P40424 430 aa25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 RHBDL3P58872 404 aa25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 NAA30Q147X3 362 aaPredicted RBP25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 KRT25Q7Z3Z0 450 aa25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 ANKRD20A12PQ8NF67 263 aa25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 CTNND2Q9UQB3 1225 aa25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 PAK1Q13153 545 aa25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 IGSF22Q8N9C0 903 aa25.15■■□□□ 1.62
NKX2-1-201ENST00000354822 TEX33O43247 280 aa25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 UBA7P41226 1012 aa25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 NOVP48745 357 aa25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 INF2Q27J81 1249 aa25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 RRP36Q96EU6 259 aaKnown RBP25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 ARID3AQ99856 593 aa25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 C6orf50Q9HD87 102 aa25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 LIMA1Q9UHB6 759 aaKnown RBP25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 ITIH6Q6UXX5 1313 aa25.14■■□□□ 1.62
NKX2-1-201ENST00000354822 ZNF397Q8NF99 534 aaPredicted RBP25.14■■□□□ 1.61
NKX2-1-201ENST00000354822 AK8Q96MA6 479 aa25.14■■□□□ 1.61
NKX2-1-201ENST00000354822 POLLQ9UGP5 575 aa25.14■■□□□ 1.61
NKX2-1-201ENST00000354822 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.14■■□□□ 1.61
NKX2-1-201ENST00000354822 CCDC51Q96ER9 411 aa25.13■■□□□ 1.61
NKX2-1-201ENST00000354822 CUEDC2Q9H467 287 aa25.13■■□□□ 1.61
NKX2-1-201ENST00000354822 SUGT1Q9Y2Z0 365 aa25.13■■□□□ 1.61
NKX2-1-201ENST00000354822 LRRC37AA6NMS7 1700 aa25.13■■□□□ 1.61
NKX2-1-201ENST00000354822 SNED1Q8TER0 1413 aa25.13■■□□□ 1.61
NKX2-1-201ENST00000354822 TPM1P09493 284 aa25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 NAPAP54920 295 aa25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 KCNB1Q14721 858 aa25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 KARSQ15046 597 aaKnown RBP25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 MAGEF1Q9HAY2 307 aa25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 SEC63Q9UGP8 760 aaKnown RBP25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 MTMR7Q9Y216 660 aa25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 CDK5RAP2Q96SN8 1893 aa25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 GOLGA8HP0CJ92 632 aa25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 ORC2Q13416 577 aaPredicted RBP25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 RASSF8Q8NHQ8 419 aa25.12■■□□□ 1.61
NKX2-1-201ENST00000354822 C6orf229H3BNL8 230 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 H7C1D1 291 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 SOGA3Q5TF21 947 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 CNGA4Q8IV77 575 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 SP8Q8IXZ3 490 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 NELFBQ8WX92 580 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 TMEM60Q9H2L4 133 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 hCG_1984214I3L0E3 225 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 PLSCR1O15162 318 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 RBL2Q08999 1139 aa25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 NONOQ15233 471 aaKnown RBP eCLIP25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 ZNF713Q8N859 430 aaPredicted RBP25.11■■□□□ 1.61
NKX2-1-201ENST00000354822 CEP95Q96GE4 821 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms