RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 UIMC1Q96RL1 719 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 NUP88Q99567 741 aaPredicted RBP10.84□□□□□ -0.67
RPE-201ENST00000354506 CDC23Q9UJX2 597 aa10.84□□□□□ -0.67
RPE-201ENST00000354506 CCDC151A5D8V7 595 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 NMT2O60551 498 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 VSNL1P62760 191 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 PFKFB3Q16875 520 aaPredicted RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 DNAJC21Q5F1R6 531 aaKnown RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 CNGA4Q8IV77 575 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 CCDC24Q8N4L8 307 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 RASSF8Q8NHQ8 419 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 NSUN4Q96CB9 384 aaKnown RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 ABHD10Q9NUJ1 306 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 MYH8P13535 1937 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 BRD3Q15059 726 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 JAKMIP3Q5VZ66 844 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 ARL6IP4Q66PJ3 421 aaKnown RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 IRF2BP1Q8IU81 584 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 IQUBQ8NA54 791 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 CHP1Q99653 195 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 MINPP1Q9UNW1 487 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 NIP7Q9Y221 180 aaKnown RBP eCLIP10.83□□□□□ -0.68
RPE-201ENST00000354506 TRIM49BA6NDI0 452 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 N4BP3O15049 544 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 MATR3P43243 847 aaKnown RBP eCLIP10.83□□□□□ -0.681e-9■■■■□ 22.9
RPE-201ENST00000354506 TCP11X2Q5H9J9 407 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 BEND6Q5SZJ8 279 aaPredicted RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 ZNF658Q5TYW1 1059 aaPredicted RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 RCSD1Q6JBY9 416 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 TMED8Q6PL24 325 aaPredicted RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 IQCA1Q86XH1 822 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 RASGRP4Q8TDF6 673 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 PYM1Q9BRP8 204 aaKnown RBP10.83□□□□□ -0.68
RPE-201ENST00000354506 RSPH14Q9UHP6 348 aa10.83□□□□□ -0.68
RPE-201ENST00000354506 MCM7P33993 719 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 TUBB4BP68371 445 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 AMPD2Q01433 879 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 SBK1Q52WX2 424 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 TMTC1Q8IUR5 882 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 TTF2Q9UNY4 1162 aaKnown RBP10.82□□□□□ -0.68
RPE-201ENST00000354506 MAST2Q6P0Q8 1798 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 LOC102724428A0A0B4J2F2 783 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 SCG2P13521 617 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 ATP6V1AP38606 617 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 SIK1P57059 783 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 RRAGBQ5VZM2 374 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 CLEC4GQ6UXB4 293 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 ANKS1AQ92625 1134 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 DCP1AQ9NPI6 582 aaPredicted RBP10.82□□□□□ -0.68
RPE-201ENST00000354506 MYO1AQ9UBC5 1043 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 GDAQ9Y2T3 454 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 IRS2Q9Y4H2 1338 aa10.82□□□□□ -0.68
RPE-201ENST00000354506 USP17L12C9JPN9 530 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 USP17L21D6R901 530 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 KIF5CO60282 957 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 ZPR1O75312 459 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 FILIP1LQ4L180 1135 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 NAALADL2Q58DX5 795 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 SLC10A5Q5PT55 438 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 CEP112Q8N8E3 955 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 ZNF507Q8TCN5 953 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 GNL3LQ9NVN8 582 aaKnown RBP10.81□□□□□ -0.68
RPE-201ENST00000354506 MKRN1Q9UHC7 482 aaKnown RBP10.81□□□□□ -0.68
RPE-201ENST00000354506 FEZ2Q9UHY8 353 aaPredicted RBP10.81□□□□□ -0.68
RPE-201ENST00000354506 NRAPQ86VF7 1730 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 PP2D1A8MPX8 630 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 LONP1P36776 959 aaKnown RBP10.81□□□□□ -0.68
RPE-201ENST00000354506 COPB1P53618 953 aaKnown RBP10.81□□□□□ -0.68
RPE-201ENST00000354506 BRMS1Q9HCU9 246 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 SH3GLB2Q9NR46 395 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 REXO2Q9Y3B8 237 aaKnown RBP10.81□□□□□ -0.68
RPE-201ENST00000354506 KCNQ4P56696 695 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 PAK1Q13153 545 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 TRIM14Q14142 442 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 FAM47AQ5JRC9 791 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 ZNF662Q6ZS27 426 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 PIK3AP1Q6ZUJ8 805 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 L1RE1Q9UN81 338 aa10.81□□□□□ -0.68
RPE-201ENST00000354506 KLRC4O43908 158 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 RPN1P04843 607 aaKnown RBP10.8□□□□□ -0.68
RPE-201ENST00000354506 PRCPP42785 496 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 MECOMQ03112 1051 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 CYP26C1Q6V0L0 522 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 ANKRD18AQ8IVF6 992 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 ADSSL1Q8N142 457 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 ATP8A2Q9NTI2 1148 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 PSD3Q9NYI0 1048 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 SMARCAL1Q9NZC9 954 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 KCNJ18B7U540 433 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 H7C1D1 291 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 TULP2O00295 520 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 ZNF185O15231 689 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 SEMA3FQ13275 785 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 KCNJ12Q14500 433 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 NELFBQ8WX92 580 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 PCMTD1Q96MG8 357 aaPredicted RBP10.8□□□□□ -0.68
RPE-201ENST00000354506 IL17RBQ9NRM6 502 aa10.8□□□□□ -0.68
RPE-201ENST00000354506 DUSP10Q9Y6W6 482 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms