RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 STAG1Q8WVM7 1258 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 EPN3Q9H201 632 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 BAIAP2L1Q9UHR4 511 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 MCM8Q9UJA3 840 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 SRPRBQ9Y5M8 271 aaKnown RBP8.52□□□□□ -1.05
BRCA1-201ENST00000352993 LAMA4Q16363 1823 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 CEMIPQ8WUJ3 1361 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 PALLDQ8WX93 1383 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 hCG_1642624A0A1W2PR95 340 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 ZAP70P43403 619 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 HERVK_113P62684 666 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 CUL4BQ13620 913 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 NT5DC1Q5TFE4 455 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 CDKAL1Q5VV42 579 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 PAPD7Q5XG87 772 aaKnown RBP8.52□□□□□ -1.05
BRCA1-201ENST00000352993 PARP9Q8IXQ6 854 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 TEX11Q8IYF3 940 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 ANKRD13CQ8N6S4 541 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 CCDC42Q96M95 316 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 HAUS2Q9NVX0 235 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 THSD7AQ9UPZ6 1657 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 SPATA31A6Q5VVP1 1343 aa8.52□□□□□ -1.05
BRCA1-201ENST00000352993 PPP1R12AO14974 1030 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-201ENST00000352993 MMP1P03956 469 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 IL15P40933 162 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-201ENST00000352993 DDR1Q08345 913 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 PREPLQ4J6C6 727 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-201ENST00000352993 TCP11X2Q5H9J9 407 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 ALS2CLQ60I27 953 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 TTC5Q8N0Z6 440 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 OXER1Q8TDS5 423 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 APPBP2Q92624 585 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 TRIM47Q96LD4 638 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 SH3GL2Q99962 352 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 VCPKMTQ9H867 229 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 NFU1Q9UMS0 254 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 RIPOR2Q9Y4F9 1068 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 RGPD1P0DJD0 1748 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 ERICH2A1L162 156 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 PPP1R3GB7ZBB8 358 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 SH2B2O14492 632 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-201ENST00000352993 PPP1R37O75864 691 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 ADORA1P30542 326 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 SMTNP53814 917 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 RTN1Q16799 776 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 TBC1D10CQ8IV04 446 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 SPATA4Q8NEY3 305 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 GSDMAQ96QA5 445 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 PUS3Q9BZE2 481 aaKnown RBP8.51□□□□□ -1.05
BRCA1-201ENST00000352993 LRWD1Q9UFC0 647 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 ITIH6Q6UXX5 1313 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 TRIM49BA6NDI0 452 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 ZFYP08048 801 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-201ENST00000352993 GUCY2DQ02846 1103 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 DPYDQ12882 1025 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 MSL1Q68DK7 614 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 NFRKBQ6P4R8 1299 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 KRT26Q7Z3Y9 468 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 TACO1Q9BSH4 297 aaKnown RBP8.51□□□□□ -1.05
BRCA1-201ENST00000352993 STIM2Q9P246 746 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 RGPD8O14715 1765 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-201ENST00000352993 ANKARQ7Z5J8 1434 aa8.51□□□□□ -1.05
BRCA1-201ENST00000352993 A0A087X0B3 334 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 FAM205CA6NFA0 338 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 MOCS3O95396 460 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 PARP1P09874 1014 aaKnown RBP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 AMOTQ4VCS5 1084 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 EMBQ6PCB8 327 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 MYCBPAPQ8TBZ2 947 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 RSRC1Q96IZ7 334 aaKnown RBP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 NHEJ1Q9H9Q4 299 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 MLXIPQ9HAP2 919 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 EPB41L5Q9HCM4 733 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 DDX20Q9UHI6 824 aaKnown RBP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 GDAQ9Y2T3 454 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 AKAP12Q02952 1782 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 ANKRD18BA2A2Z9 1011 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 SEMA3EO15041 775 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 AKR1B10O60218 316 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 PTGISQ16647 500 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 CYB5D1Q6P9G0 228 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 IFT20Q8IY31 132 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 RBM33Q96EV2 1170 aaKnown RBP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 ALS2CR12Q96Q35 445 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 A1CFQ9NQ94 594 aaKnown RBP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 LIMA1Q9UHB6 759 aaKnown RBP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 AMOTL2Q9Y2J4 779 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 CCDC189A1A4V9 331 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 RCCD1A6NED2 376 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 B4DLN1 442 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 EYA2O00167 538 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 NCK2O43639 380 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 BUB1BO60566 1050 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-201ENST00000352993 XBP1P17861 261 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 SKOR1P84550 965 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 CTDSPL2Q05D32 466 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 TBC1D8BQ0IIM8 1120 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 PDIA6Q15084 440 aa8.5□□□□□ -1.05
BRCA1-201ENST00000352993 TYW1BQ6NUM6 668 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms