RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 C6orf50Q9HD87 102 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 STK32BQ9NY57 414 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 GJA3Q9Y6H8 435 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 LRP6O75581 1613 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 ACTN4O43707 911 aaKnown RBP11.74□□□□□ -0.53
SMPD4-201ENST00000351288 TROAPQ12815 778 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 DPYDQ12882 1025 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 AOC3Q16853 763 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 ARHGAP29Q52LW3 1261 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 MIGA2Q7L4E1 593 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 CCDC148Q8NFR7 591 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 NUP88Q99567 741 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-201ENST00000351288 TDRD3Q9H7E2 651 aaKnown RBP11.74□□□□□ -0.53
SMPD4-201ENST00000351288 PNPLA7Q6ZV29 1317 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 PAPPAQ13219 1627 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 USP17L5A8MUK1 530 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 IKBKBO14920 756 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 CBFA2T2O43439 604 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 ATRNO75882 1429 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 ZSCAN20P17040 1043 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-201ENST00000351288 RC3H1Q5TC82 1133 aaKnown RBP11.74□□□□□ -0.53
SMPD4-201ENST00000351288 DEFB132Q7Z7B7 95 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 COL23A1Q86Y22 540 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-201ENST00000351288 IQUBQ8NA54 791 aa11.74□□□□□ -0.53
SMPD4-201ENST00000351288 BAG1Q99933 345 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-201ENST00000351288 FOXP1Q9H334 677 aaPredicted RBP11.74□□□□□ -0.53
SMPD4-201ENST00000351288 SEC31AO94979 1220 aaKnown RBP11.73□□□□□ -0.53
SMPD4-201ENST00000351288 DDR1Q08345 913 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 TMTC3Q6ZXV5 915 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 TIGD1Q96MW7 591 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 IMPACTQ9P2X3 320 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 SEMA3EO15041 775 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 ABL1P00519 1130 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 ALDH1B1P30837 517 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 STIM1Q13586 685 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 UBE2SQ16763 222 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 CCDC43Q96MW1 224 aaKnown RBP11.73□□□□□ -0.53
SMPD4-201ENST00000351288 BPIFA3Q9BQP9 254 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 SRPRBQ9Y5M8 271 aaKnown RBP11.73□□□□□ -0.53
SMPD4-201ENST00000351288 UBXN2AP68543 259 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 CUL4BQ13620 913 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 TBC1D22AQ8WUA7 517 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 GJA10Q969M2 543 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 TFR2Q9UP52 801 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 PCDHAC2Q9Y5I4 1007 aa11.73□□□□□ -0.53
SMPD4-201ENST00000351288 ZBTB7AO95365 584 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 PDE6BP35913 854 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 CPXCR1Q8N123 301 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 PAGE5Q96GU1 130 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 SERPINB13Q9UIV8 391 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 GDAQ9Y2T3 454 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 PPP2R2CQ9Y2T4 447 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 DISP2A7MBM2 1401 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 IPO7O95373 1038 aaKnown RBP11.72□□□□□ -0.53
SMPD4-201ENST00000351288 TEX35Q5T0J7 233 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 C12orf60Q5U649 245 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 HOMER2Q9NSB8 354 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 RNF216Q9NWF9 866 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-201ENST00000351288 TMEM260Q9NX78 707 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 ZBTB12Q9Y330 459 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-201ENST00000351288 TRIM49BA6NDI0 452 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 CHMP2AO43633 222 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 AKR1B1P15121 316 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 MTIF2P46199 727 aaKnown RBP11.72□□□□□ -0.53
SMPD4-201ENST00000351288 ETF1P62495 437 aaKnown RBP11.72□□□□□ -0.53
SMPD4-201ENST00000351288 TYW1BQ6NUM6 668 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 CCDC12Q8WUD4 166 aaPredicted RBP11.72□□□□□ -0.53
SMPD4-201ENST00000351288 CALML4Q96GE6 196 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 TAB2Q9NYJ8 693 aa11.72□□□□□ -0.53
SMPD4-201ENST00000351288 FAM205AQ6ZU69 1335 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 EPS15P42566 896 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 RBL2Q08999 1139 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 FUT2Q10981 343 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 IL17AQ16552 155 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 CCDC84Q86UT8 332 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-201ENST00000351288 REXO1Q8N1G1 1221 aaKnown RBP11.71□□□□□ -0.53
SMPD4-201ENST00000351288 TC2NQ8N9U0 490 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 STK36Q9NRP7 1315 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 STRCQ7RTU9 1775 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 PLEKHG2Q9H7P9 1386 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 ERICH4A6NGS2 130 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 SP4Q02446 784 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-201ENST00000351288 NFIAQ12857 509 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 MORC3Q14149 939 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 SPECC1LQ69YQ0 1117 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 CCDC174Q6PII3 467 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 ZNF771Q7L3S4 317 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-201ENST00000351288 TICAM2Q86XR7 235 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 REXO1L1PQ8IX06 675 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 PHF20Q9BVI0 1012 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 MMRN2Q9H8L6 949 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 MRPL44Q9H9J2 332 aaKnown RBP11.71□□□□□ -0.53
SMPD4-201ENST00000351288 PUF60Q9UHX1 559 aaKnown RBP11.71□□□□□ -0.53
SMPD4-201ENST00000351288 ZBTB21Q9ULJ3 1066 aa11.71□□□□□ -0.53
SMPD4-201ENST00000351288 DOT1LQ8TEK3 1739 aa11.71□□□□□ -0.54
SMPD4-201ENST00000351288 GNA11P29992 359 aa11.71□□□□□ -0.54
SMPD4-201ENST00000351288 TMEM266Q2M3C6 531 aa11.71□□□□□ -0.54
SMPD4-201ENST00000351288 IGSF22Q8N9C0 903 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms