RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 ZDHHC13Q8IUH4 622 aa9.47□□□□□ -0.89
UBE2D3-204ENST00000349311 EAF1Q96JC9 268 aaPredicted RBP9.47□□□□□ -0.89
UBE2D3-204ENST00000349311 PPP1R9BQ96SB3 815 aa9.47□□□□□ -0.89
UBE2D3-204ENST00000349311 POLR3KQ9Y2Y1 108 aaPredicted RBP9.47□□□□□ -0.89
UBE2D3-204ENST00000349311 ALKQ9UM73 1620 aa9.46□□□□□ -0.89
UBE2D3-204ENST00000349311 ST20-MTHFSA0A0A6YYL1 179 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 PRR19A6NJB7 356 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 F13BP05160 661 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 CRKP46108 304 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 SLBPQ14493 270 aaKnown RBP eCLIP9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 SNAP47Q5SQN1 464 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 REC114Q7Z4M0 266 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 KCT2Q8NC54 265 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 FBXO27Q8NI29 283 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 TESK2Q96S53 571 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 FBRSQ9HAH7 460 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 DAGLAQ9Y4D2 1042 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 SLIT1O75093 1534 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 ASXL1Q8IXJ9 1541 aa9.46□□□□□ -0.9
UBE2D3-204ENST00000349311 DYNC1I1O14576 645 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 TMEM201Q5SNT2 666 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 SLITRK4Q8IW52 837 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 PMFBP1Q8TBY8 1022 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 ZNF507Q8TCN5 953 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 GBP4Q96PP9 640 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 ADAM30Q9UKF2 790 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 PCDHGB7Q9Y5F8 929 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 NKTRP30414 1462 aaKnown RBP9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 ARHGAP23Q9P227 1491 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
UBE2D3-204ENST00000349311 RNGTTO60942 597 aaKnown RBP9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 GRK4P32298 578 aa9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 DUSP27Q5VZP5 1158 aa9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 NT5DC4Q86YG4 428 aa9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 NGEFQ8N5V2 710 aa9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 MFSD14AQ96MC6 490 aa9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 IBTKQ9P2D0 1353 aaPredicted RBP9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 RIMS2Q9UQ26 1411 aa9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 NCOA3Q9Y6Q9 1424 aa9.44□□□□□ -0.9
UBE2D3-204ENST00000349311 DIP2AQ14689 1571 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 PRAMEF27A3QJZ7 478 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 RIPK4P57078 832 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 MLECQ14165 292 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 NKG7Q16617 165 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 CPSF6Q16630 551 aaKnown RBP eCLIP9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 OGFOD3Q6PK18 319 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 HSCBQ8IWL3 235 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.43□□□□□ -0.94e-11■□□□□ 10.1
UBE2D3-204ENST00000349311 MRPL41Q8IXM3 137 aaKnown RBP9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 ZNF654Q8IZM8 581 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 SHKBP1Q8TBC3 707 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 SPON2Q9BUD6 331 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 RNF112Q9ULX5 631 aa9.43□□□□□ -0.9
UBE2D3-204ENST00000349311 CEP170BQ9Y4F5 1589 aaPredicted RBP9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 ZNF521Q96K83 1311 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 ATE1O95260 518 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 TCF3P15923 654 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 MCM5P33992 734 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 DMTNQ08495 405 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 C9orf131Q5VYM1 1079 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 FAM214BQ7L5A3 538 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 KIAA0825Q8IV33 1275 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 TGIF2Q9GZN2 237 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 UBP1Q9NZI7 540 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 TJP2Q9UDY2 1190 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 CORINQ9Y5Q5 1042 aa9.42□□□□□ -0.9
UBE2D3-204ENST00000349311 TMEM2Q9UHN6 1383 aa9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 ZNF500O60304 480 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 BPNT1O95861 308 aa9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 TMF1P82094 1093 aa9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 SLFN5Q08AF3 891 aa9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 HID1Q8IV36 788 aa9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 MCATQ8IVS2 390 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 ACSF2Q96CM8 615 aaPredicted RBP9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 PUS7Q96PZ0 661 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 GTPBP4Q9BZE4 634 aaKnown RBP9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 EHMT1Q9H9B1 1298 aa9.41□□□□□ -0.9
UBE2D3-204ENST00000349311 PTPRMP28827 1452 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 E9PSI1 815 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 LRIG2O94898 1065 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 PDE4BQ07343 736 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 CDK5R2Q13319 367 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 TAF3Q5VWG9 929 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 TRMT2AQ8IZ69 625 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 REXO1Q8N1G1 1221 aaKnown RBP9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 RASGRP4Q8TDF6 673 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 DUSP23Q9BVJ7 150 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 LGR6Q9HBX8 967 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 USP32Q8NFA0 1604 aa9.4□□□□□ -0.9
UBE2D3-204ENST00000349311 CPS1P31327 1500 aa9.4□□□□□ -0.91
UBE2D3-204ENST00000349311 MED14O60244 1454 aa9.4□□□□□ -0.91
UBE2D3-204ENST00000349311 TECPR2O15040 1411 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 DISP3Q9P2K9 1392 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 PLEKHH1Q9ULM0 1364 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 UQCRHLA0A096LP55 91 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 FAM170BA6NMN3 283 aa9.39□□□□□ -0.91
UBE2D3-204ENST00000349311 WDR64B1ANS9 1081 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms