RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 TOM1O60784 492 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 KCNQ4P56696 695 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 EVX2Q03828 476 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 SH3RF3Q8TEJ3 882 aaPredicted RBP17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 AK8Q96MA6 479 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 DISC1Q9NRI5 854 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 ADGRG1Q9Y653 693 aa17.47■□□□□ 0.39
TNFSF13-202ENST00000349228 CASP1P29466 404 aa17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 RFC4P35249 363 aa17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 ORC2Q13416 577 aaPredicted RBP17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 PTPN21Q16825 1174 aa17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 RASGRP2Q7LDG7 609 aa17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 SLF2Q8IX21 1173 aa17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 NGLY1Q96IV0 654 aa17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 SPZ1Q9BXG8 430 aa17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 TTF2Q9UNY4 1162 aaKnown RBP17.46■□□□□ 0.39
TNFSF13-202ENST00000349228 N4BP3O15049 544 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 STIM1Q13586 685 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 KRT31Q15323 416 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 TRAPPC3LQ5T215 181 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 GPR161Q8N6U8 529 aaKnown RBP17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 NOC3LQ8WTT2 800 aaKnown RBP17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 NELFBQ8WX92 580 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 MTRQ99707 1265 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 CARD6Q9BX69 1037 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 BLZF1Q9H2G9 400 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 PCDHA6Q9UN73 950 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 PCDHA8Q9Y5H6 950 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 MRFAP1Q9Y605 127 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 KIF5CO60282 957 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 VEGFAP15692 232 aaPredicted RBP17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 UBA7P41226 1012 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 PPP1R2P41236 205 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 COPB1P53618 953 aaKnown RBP17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 TCP11X2Q5H9J9 407 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 KRT25Q7Z3Z0 450 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 SMYD4Q8IYR2 804 aaPredicted RBP17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 STAG2Q8N3U4 1231 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 KIFC2Q96AC6 838 aa17.45■□□□□ 0.38
TNFSF13-202ENST00000349228 STXBP3O00186 592 aa17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 ADRA2BP18089 450 aa17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 ATP2B4P23634 1241 aa17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 CREBRFQ8IUR6 639 aa17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 CCDC47Q96A33 483 aaKnown RBP17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 DYNLL2Q96FJ2 89 aa17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 WDR24Q96S15 920 aa17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 TMEM47Q9BQJ4 181 aa17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 FAM205AQ6ZU69 1335 aa17.44■□□□□ 0.38
TNFSF13-202ENST00000349228 KCNJ18B7U540 433 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 RASA1P20936 1047 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 EEF1GP26641 437 aaKnown RBP17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 GNA11P29992 359 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 CASP14P31944 242 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 KCNJ12Q14500 433 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 JAKMIP3Q5VZ66 844 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 TMCO3Q6UWJ1 677 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 ADSSL1Q8N142 457 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 FNBP4Q8N3X1 1017 aaPredicted RBP17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 TGFBRAP1Q8WUH2 860 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 GPKOWQ92917 476 aaPredicted RBP eCLIP17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 FAM163AQ96GL9 167 aaPredicted RBP17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 ZMYND12Q9H0C1 365 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 PRDM10Q9NQV6 1147 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 MYO1AQ9UBC5 1043 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 GPR75-ASB3A0A0A6YYF3 556 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 SOWAHDA6NJG2 315 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 FANCGO15287 622 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 GYPCP04921 128 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 CHRM1P11229 460 aaPredicted RBP17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 PPP2R3AQ06190 1150 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 CYP26C1Q6V0L0 522 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 RAD9BQ6WBX8 426 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 C16orf86Q6ZW13 317 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 CNBD1Q8NA66 436 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 NEDD1Q8NHV4 660 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 RABGGTAQ92696 567 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 STAMQ92783 540 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 THAP9Q9H5L6 903 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 KBTBD4Q9NVX7 518 aa17.43■□□□□ 0.38
TNFSF13-202ENST00000349228 A0A1W2PQC6 194 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 USP17L3A6NCW0 530 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 USP17L4A6NCW7 530 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 hCG_1984214I3L0E3 225 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 RHOBTB3O94955 611 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 KIF20AO95235 890 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 CLCN6P51797 869 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 SMIM5Q71RC9 77 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 USP17L1Q7RTZ2 530 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 HEATR3Q7Z4Q2 680 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 ZNF713Q8N859 430 aaPredicted RBP17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 LRRN4CLQ8ND94 238 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 CERKQ8TCT0 537 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 RTFDC1Q9BY42 306 aaPredicted RBP17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 C6orf50Q9HD87 102 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 PRDM4Q9UKN5 801 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 KLRF2D3W0D1 207 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 IL1R1P14778 569 aa17.42■□□□□ 0.38
TNFSF13-202ENST00000349228 HOXA7P31268 230 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms