RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 AKR1B1P15121 316 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 ZDHHC15Q96MV8 337 aa23.16■■□□□ 1.3
CHRNA3-202ENST00000348639 PDHBP11177 359 aa23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 LONP1P36776 959 aaKnown RBP23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 SEC63Q9UGP8 760 aaKnown RBP23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 HLA-DOAP06340 250 aa23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 ATP1A3P13637 1013 aa23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 NAPAP54920 295 aa23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 NFIAQ12857 509 aa23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 RIOX1Q9H6W3 641 aa23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 PCDHAC2Q9Y5I4 1007 aa23.15■■□□□ 1.3
CHRNA3-202ENST00000348639 C10orf71Q711Q0 1435 aa23.14■■□□□ 1.3
CHRNA3-202ENST00000348639 EIF6P56537 245 aaKnown RBP23.14■■□□□ 1.29
CHRNA3-202ENST00000348639 E2F4Q16254 413 aa23.14■■□□□ 1.29
CHRNA3-202ENST00000348639 ASPRV1Q53RT3 343 aa23.14■■□□□ 1.29
CHRNA3-202ENST00000348639 DACT2Q5SW24 774 aa23.14■■□□□ 1.29
CHRNA3-202ENST00000348639 IQUBQ8NA54 791 aa23.14■■□□□ 1.29
CHRNA3-202ENST00000348639 SNHG28P0DPA3 235 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 GNA11P29992 359 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 SHMT1P34896 483 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 AFMP43652 599 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 CACNB3P54284 484 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 HDLBPQ00341 1268 aaKnown RBP23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 ARID5BQ14865 1188 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 CT47A1Q5JQC4 288 aaPredicted RBP23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 EHD4Q9H223 541 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 C6orf50Q9HD87 102 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 FANCLQ9NW38 375 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 CBFA2T2O43439 604 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 TTLL1O95922 423 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 DPYDQ12882 1025 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 INF2Q27J81 1249 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 HOMER1Q86YM7 354 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 ENOX1Q8TC92 643 aaKnown RBP23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 C7orf43Q8WVR3 580 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 GSDMAQ96QA5 445 aa23.13■■□□□ 1.29
CHRNA3-202ENST00000348639 SMCO2A6NFE2 343 aa23.12■■□□□ 1.29
CHRNA3-202ENST00000348639 hCG_1984214I3L0E3 225 aa23.12■■□□□ 1.29
CHRNA3-202ENST00000348639 TCP10Q12799 353 aa23.12■■□□□ 1.29
CHRNA3-202ENST00000348639 KRT25Q7Z3Z0 450 aa23.12■■□□□ 1.29
CHRNA3-202ENST00000348639 CLEC10AQ8IUN9 316 aa23.12■■□□□ 1.29
CHRNA3-202ENST00000348639 ZNF713Q8N859 430 aaPredicted RBP23.12■■□□□ 1.29
CHRNA3-202ENST00000348639 PIGSQ96S52 555 aa23.12■■□□□ 1.29
CHRNA3-202ENST00000348639 SCN9AQ15858 1988 aa23.12■■□□□ 1.29
CHRNA3-202ENST00000348639 LAD1O00515 517 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 C21orf2O43822 256 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 SERPINC1P01008 464 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 UBASH3AP57075 661 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 DHX8Q14562 1220 aaKnown RBP23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 TMC6Q7Z403 805 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 LRRC47Q8N1G4 583 aaKnown RBP23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 UBA5Q9GZZ9 404 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 VAT1LQ9HCJ6 419 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 MYH8P13535 1937 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 ERCC5P28715 1186 aaPredicted RBP23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 FMR1Q06787 632 aaKnown RBP eCLIP23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 SOGA3Q5TF21 947 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 ZFPM1Q8IX07 1006 aa23.11■■□□□ 1.29
CHRNA3-202ENST00000348639 ESYT2A0FGR8 921 aa23.1■■□□□ 1.29
CHRNA3-202ENST00000348639 SF3B2Q13435 895 aaKnown RBP23.1■■□□□ 1.29
CHRNA3-202ENST00000348639 PDXDC2PQ6P474 469 aa23.1■■□□□ 1.29
CHRNA3-202ENST00000348639 DTHD1Q6ZMT9 781 aa23.1■■□□□ 1.29
CHRNA3-202ENST00000348639 DEFB132Q7Z7B7 95 aa23.1■■□□□ 1.29
CHRNA3-202ENST00000348639 CCDC17Q96LX7 622 aa23.1■■□□□ 1.29
CHRNA3-202ENST00000348639 FRMPD2Q68DX3 1309 aaPredicted RBP23.1■■□□□ 1.29
CHRNA3-202ENST00000348639 MPHOSPH10O00566 681 aaKnown RBP23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 SLURP2P0DP57 97 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 SKILP12757 684 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 TXLNAP40222 546 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 CCZ1BP86790 482 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 CCZ1P86791 482 aaPredicted RBP23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 PRIMPOLQ96LW4 560 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 DHX36Q9H2U1 1008 aaKnown RBP23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 PPIP5K2O43314 1243 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 PRPHP41219 470 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 NONOQ15233 471 aaKnown RBP eCLIP23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 PPP4R3BQ5MIZ7 849 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 CCDC150Q8NCX0 1101 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 IDI2Q9BXS1 227 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 TMEM60Q9H2L4 133 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 NFE2L3Q9Y4A8 694 aa23.09■■□□□ 1.29
CHRNA3-202ENST00000348639 ZNF18P17022 549 aa23.08■■□□□ 1.29
CHRNA3-202ENST00000348639 DPF2Q92785 391 aa23.08■■□□□ 1.29
CHRNA3-202ENST00000348639 CASP1P29466 404 aa23.08■■□□□ 1.28
CHRNA3-202ENST00000348639 ZNF543Q08ER8 600 aa23.08■■□□□ 1.28
CHRNA3-202ENST00000348639 CFAP100Q494V2 611 aa23.08■■□□□ 1.28
CHRNA3-202ENST00000348639 CC2D2BQ6DHV5 1058 aa23.08■■□□□ 1.28
CHRNA3-202ENST00000348639 ZSCAN29Q8IWY8 852 aaPredicted RBP23.08■■□□□ 1.28
CHRNA3-202ENST00000348639 SERPINA10Q9UK55 444 aa23.08■■□□□ 1.28
CHRNA3-202ENST00000348639 NPM3O75607 178 aaKnown RBP23.07■■□□□ 1.28
CHRNA3-202ENST00000348639 BAG6P46379 1132 aa23.07■■□□□ 1.28
CHRNA3-202ENST00000348639 ATP2B2Q01814 1243 aa23.07■■□□□ 1.28
CHRNA3-202ENST00000348639 SUPT20HQ8NEM7 779 aa23.07■■□□□ 1.28
CHRNA3-202ENST00000348639 MED15Q96RN5 788 aa23.07■■□□□ 1.28
CHRNA3-202ENST00000348639 GREB1LQ9C091 1923 aaPredicted RBP23.07■■□□□ 1.28
CHRNA3-202ENST00000348639 GTPBP6O43824 516 aaPredicted RBP23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 DNAJC18Q9H819 358 aa23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 ZNF646O15015 1829 aaPredicted RBP23.06■■□□□ 1.28
CHRNA3-202ENST00000348639 FAM196BA6NMK8 535 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms