RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SYDE2Q5VT97 1194 aa31.34■■■□□ 2.61
SSBP4-202ENST00000348495 AIFM3Q96NN9 605 aa31.34■■■□□ 2.61
SSBP4-202ENST00000348495 CIZ1Q9ULV3 898 aaPredicted RBP31.34■■■□□ 2.61
SSBP4-202ENST00000348495 PDCP20941 246 aa31.33■■■□□ 2.61
SSBP4-202ENST00000348495 PFKFB3Q16875 520 aaPredicted RBP31.33■■■□□ 2.61
SSBP4-202ENST00000348495 LARP1BQ659C4 914 aaKnown RBP31.33■■■□□ 2.61
SSBP4-202ENST00000348495 FAM160B2Q86V87 743 aa31.33■■■□□ 2.61
SSBP4-202ENST00000348495 PROCA1Q8NCQ7 364 aaPredicted RBP31.33■■■□□ 2.61
SSBP4-202ENST00000348495 CHURC1Q8WUH1 139 aa31.33■■■□□ 2.61
SSBP4-202ENST00000348495 WASF1Q92558 559 aa31.33■■■□□ 2.61
SSBP4-202ENST00000348495 VAT1LQ9HCJ6 419 aa31.33■■■□□ 2.61
SSBP4-202ENST00000348495 TLL2Q9Y6L7 1015 aa31.33■■■□□ 2.61
SSBP4-202ENST00000348495 MOGSQ13724 837 aa31.32■■■□□ 2.61
SSBP4-202ENST00000348495 RRP36Q96EU6 259 aaKnown RBP31.32■■■□□ 2.61
SSBP4-202ENST00000348495 PIGSQ96S52 555 aa31.32■■■□□ 2.61
SSBP4-202ENST00000348495 ALG1Q9BT22 464 aa31.32■■■□□ 2.61
SSBP4-202ENST00000348495 FBXO28Q9NVF7 368 aa31.32■■■□□ 2.61
SSBP4-202ENST00000348495 PRR12Q9ULL5 1215 aa31.32■■■□□ 2.61
SSBP4-202ENST00000348495 SCG2P13521 617 aa31.32■■■□□ 2.6
SSBP4-202ENST00000348495 SPRYD7Q5W111 196 aa31.32■■■□□ 2.6
SSBP4-202ENST00000348495 ZBTB48P10074 688 aaPredicted RBP31.31■■■□□ 2.6
SSBP4-202ENST00000348495 PIBF1Q8WXW3 757 aa31.31■■■□□ 2.6
SSBP4-202ENST00000348495 PARP14Q460N5 1801 aa31.3■■■□□ 2.6
SSBP4-202ENST00000348495 IKQ13123 557 aaPredicted RBP31.3■■■□□ 2.6
SSBP4-202ENST00000348495 SNAPC2Q13487 334 aa31.3■■■□□ 2.6
SSBP4-202ENST00000348495 PKP1Q13835 747 aa31.3■■■□□ 2.6
SSBP4-202ENST00000348495 RGS22Q8NE09 1264 aa31.3■■■□□ 2.6
SSBP4-202ENST00000348495 TANGO6Q9C0B7 1094 aa31.3■■■□□ 2.6
SSBP4-202ENST00000348495 TMEM88BA6NKF7 163 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 HOMER1Q86YM7 354 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 SLF1Q9BQI6 1058 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 ZBTB5O15062 677 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 STX6O43752 255 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 PDIA4P13667 645 aaKnown RBP31.29■■■□□ 2.6
SSBP4-202ENST00000348495 RLFQ13129 1914 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 TREML2Q5T2D2 321 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 CATSPERGQ6ZRH7 1159 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 SHISA4Q96DD7 197 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 MS4A4AQ96JQ5 239 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 GJB4Q9NTQ9 266 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 CHMP5Q9NZZ3 219 aa31.29■■■□□ 2.6
SSBP4-202ENST00000348495 SEC63Q9UGP8 760 aaKnown RBP31.29■■■□□ 2.6
SSBP4-202ENST00000348495 PNMA6FA0A0J9YX94 578 aa31.28■■■□□ 2.6
SSBP4-202ENST00000348495 FASTKD5Q7L8L6 764 aaKnown RBP31.28■■■□□ 2.6
SSBP4-202ENST00000348495 PRPF38AQ8NAV1 312 aaKnown RBP31.28■■■□□ 2.6
SSBP4-202ENST00000348495 FBXO18Q8NFZ0 1043 aa31.28■■■□□ 2.6
SSBP4-202ENST00000348495 C8orf76Q96K31 380 aa31.28■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L15C9J2P7 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L13C9JLJ4 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L11C9JVI0 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L18D6R9N7 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L22D6RA61 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L17D6RBQ6 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L19D6RCP7 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L20D6RJB6 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 USP17L24Q0WX57 530 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 CDC37Q16543 378 aaPredicted RBP31.27■■■□□ 2.6
SSBP4-202ENST00000348495 RGMBQ6NW40 437 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 RASAL3Q86YV0 1011 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 KIFC2Q96AC6 838 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 PPP1R9AQ9ULJ8 1098 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 FLOT1O75955 427 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 HOXA7P31268 230 aaPredicted RBP31.27■■■□□ 2.6
SSBP4-202ENST00000348495 GTF2A2P52657 109 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 GADL1Q6ZQY3 521 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 RANBP17Q9H2T7 1088 aaKnown RBP31.27■■■□□ 2.6
SSBP4-202ENST00000348495 MTMR6Q9Y217 621 aa31.27■■■□□ 2.6
SSBP4-202ENST00000348495 PPP1R11O60927 126 aaPredicted RBP31.26■■■□□ 2.59
SSBP4-202ENST00000348495 QRICH1Q2TAL8 776 aa31.26■■■□□ 2.59
SSBP4-202ENST00000348495 WWC2Q6AWC2 1192 aa31.26■■■□□ 2.59
SSBP4-202ENST00000348495 HHIPL1Q96JK4 782 aa31.26■■■□□ 2.59
SSBP4-202ENST00000348495 AGTPBP1Q9UPW5 1226 aa31.26■■■□□ 2.59
SSBP4-202ENST00000348495 ZDHHC9Q9Y397 364 aa31.26■■■□□ 2.59
SSBP4-202ENST00000348495 BRD1O95696 1058 aa31.25■■■□□ 2.59
SSBP4-202ENST00000348495 ZNF157P51786 506 aaPredicted RBP31.25■■■□□ 2.59
SSBP4-202ENST00000348495 FOSBP53539 338 aa31.25■■■□□ 2.59
SSBP4-202ENST00000348495 NUCB2P80303 420 aa31.25■■■□□ 2.59
SSBP4-202ENST00000348495 GPAT2Q6NUI2 795 aa31.25■■■□□ 2.59
SSBP4-202ENST00000348495 GPKOWQ92917 476 aaPredicted RBP eCLIP31.25■■■□□ 2.59
SSBP4-202ENST00000348495 SH3GLB2Q9NR46 395 aa31.25■■■□□ 2.59
SSBP4-202ENST00000348495 BARHL2Q9NY43 387 aa31.25■■■□□ 2.59
SSBP4-202ENST00000348495 CETPP11597 493 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 COG2Q14746 738 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 OTUD7BQ6GQQ9 843 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 VPS54Q9P1Q0 977 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 hCG_1984214I3L0E3 225 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 STXBP3O00186 592 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 SNAP25P60880 206 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 KRT40Q6A162 431 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 TYW1BQ6NUM6 668 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 ZNF713Q8N859 430 aaPredicted RBP31.24■■■□□ 2.59
SSBP4-202ENST00000348495 ADAMTS5Q9UNA0 930 aa31.24■■■□□ 2.59
SSBP4-202ENST00000348495 MYPNQ86TC9 1320 aa31.23■■■□□ 2.59
SSBP4-202ENST00000348495 MKRN3Q13064 507 aaKnown RBP31.23■■■□□ 2.59
SSBP4-202ENST00000348495 HEATR3Q7Z4Q2 680 aa31.23■■■□□ 2.59
SSBP4-202ENST00000348495 FAM177A1Q8N128 213 aaPredicted RBP31.23■■■□□ 2.59
SSBP4-202ENST00000348495 ABT1Q9ULW3 272 aaKnown RBP31.23■■■□□ 2.59
SSBP4-202ENST00000348495 H3BQV1 296 aa31.22■■■□□ 2.59
SSBP4-202ENST00000348495 SLC10A3P09131 477 aa31.22■■■□□ 2.59
SSBP4-202ENST00000348495 DSG3P32926 999 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms