RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 RTFDC1Q9BY42 306 aaPredicted RBP6.86□□□□□ -1.31
CLCN3-201ENST00000347613 UBA5Q9GZZ9 404 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 CGNQ9P2M7 1197 aaKnown RBP6.86□□□□□ -1.31
CLCN3-201ENST00000347613 MRFAP1Q9Y605 127 aa6.86□□□□□ -1.31
CLCN3-201ENST00000347613 FLT1P17948 1338 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 MAST2Q6P0Q8 1798 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 STXBP3O00186 592 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 FCER1AP12319 257 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 RCAN1P53805 252 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 RRAGBQ5VZM2 374 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.85□□□□□ -1.31
CLCN3-201ENST00000347613 CNPY4Q8N129 248 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 SECISBP2LQ93073 1101 aaKnown RBP6.85□□□□□ -1.31
CLCN3-201ENST00000347613 MTA3Q9BTC8 594 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 MMTAG2Q9BU76 263 aaKnown RBP6.85□□□□□ -1.31
CLCN3-201ENST00000347613 POLLQ9UGP5 575 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 ZNF831Q5JPB2 1677 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 PHLPP2Q6ZVD8 1323 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 CNTNAP4Q9C0A0 1308 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 ARHGAP6O43182 974 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 STX10O60499 249 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 DDAH1O94760 285 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 SBK1Q52WX2 424 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 WDR59Q6PJI9 974 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 RSRC2Q7L4I2 434 aaKnown RBP6.85□□□□□ -1.31
CLCN3-201ENST00000347613 PNKPQ96T60 521 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 VAT1LQ9HCJ6 419 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 KCNQ5Q9NR82 932 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 DUSP10Q9Y6W6 482 aa6.85□□□□□ -1.31
CLCN3-201ENST00000347613 MFAP3LO75121 409 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 TBC1D8O95759 1140 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 PNMA6AP0CW24 399 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 TAL1P17542 331 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 ADRA2BP18089 450 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 ERCC5P28715 1186 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 ECM1Q16610 540 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 BLIDQ8IZY5 108 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 HINFPQ9BQA5 517 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 GNL3LQ9NVN8 582 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 ANKIB1Q9P2G1 1089 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 HDAC6Q9UBN7 1215 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 ZNF652Q9Y2D9 606 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 RPN1P04843 607 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 EIF6P56537 245 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 RHBDL3P58872 404 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 AKAP17AQ02040 695 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 STK4Q13043 487 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 FAM196AQ6ZSG2 479 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 NELFBQ8WX92 580 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 DUSP9Q99956 384 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 BCAS3Q9H6U6 928 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 ANKZF1Q9H8Y5 726 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 ATP8A2Q9NTI2 1148 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 AGPAT5Q9NUQ2 364 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 PUF60Q9UHX1 559 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 CCNL1Q9UK58 526 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 STX8Q9UNK0 236 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 LY75O60449 1722 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 PALM3A6NDB9 673 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 LRRC10BA6NIK2 292 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 USP17L5A8MUK1 530 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 AKR1B15C9JRZ8 316 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 EPHB6O15197 1021 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 CBFA2T2O43439 604 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 PPP1R11O60927 126 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 TPM4P67936 248 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 TXNRD1Q16881 649 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 TCP11X2Q5H9J9 407 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 HEATR3Q7Z4Q2 680 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 GSDMAQ96QA5 445 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 FEZ1Q99689 392 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 PARD6BQ9BYG5 372 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 CRNKL1Q9BZJ0 848 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 DDX4Q9NQI0 724 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 RBM28Q9NW13 759 aaKnown RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 PCDHA4Q9UN74 947 aa6.84□□□□□ -1.31
CLCN3-201ENST00000347613 FRMPD2Q68DX3 1309 aaPredicted RBP6.84□□□□□ -1.31
CLCN3-201ENST00000347613 TTC26A0AVF1 554 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 PLEKP08567 350 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-201ENST00000347613 ST5P78524 1137 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 GRM4Q14833 912 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 TERF2Q15554 542 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 PRR5LQ6MZQ0 368 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 KCNK18Q7Z418 384 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 ZFPM1Q8IX07 1006 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 TRIML1Q8N9V2 468 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 CTCFLQ8NI51 663 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-201ENST00000347613 ZNF507Q8TCN5 953 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 CEP95Q96GE4 821 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 CDCA7Q9BWT1 371 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-201ENST00000347613 FGFBP2Q9BYJ0 223 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 ENC1O14682 589 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 SRGAP2O75044 1071 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 USP5P45974 858 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 COPB1P53618 953 aaKnown RBP6.83□□□□□ -1.32
CLCN3-201ENST00000347613 APBA1Q02410 837 aa6.83□□□□□ -1.32
CLCN3-201ENST00000347613 DHX8Q14562 1220 aaKnown RBP6.83□□□□□ -1.32
CLCN3-201ENST00000347613 FAM43BQ6ZT52 329 aaPredicted RBP6.83□□□□□ -1.32
CLCN3-201ENST00000347613 DZIP1Q86YF9 867 aaKnown RBP6.83□□□□□ -1.32
CLCN3-201ENST00000347613 SLC35F6Q8N357 371 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms