RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 NRBP1Q9UHY1 535 aa16.08■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SMCO2A6NFE2 343 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 FAM196BA6NMK8 535 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SMTNL1A8MU46 457 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 IKBKBO14920 756 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 BMP6P22004 513 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 IL17AQ16552 155 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 INF2Q27J81 1249 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 NT5DC1Q5TFE4 455 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ARL6IP4Q66PJ3 421 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SH3BP5LQ7L8J4 393 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CCDC186Q7Z3E2 898 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 C4orf32Q8N8J7 132 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 NPM3O75607 178 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SLFN14P0C7P3 912 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 GNA11P29992 359 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SARSP49591 514 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ATP2B2Q01814 1243 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CCDC93Q567U6 631 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SMARCE1Q969G3 411 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 TDRD3Q9H7E2 651 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 C6orf50Q9HD87 102 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 GPCPD1Q9NPB8 672 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 MAN1B1Q9UKM7 699 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SIPA1L1O43166 1804 aa16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 GREB1LQ9C091 1923 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ZNF543Q08ER8 600 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CFAP100Q494V2 611 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 GRIPAP1Q4V328 841 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SOGA3Q5TF21 947 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 RTKN2Q8IZC4 609 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CCDC34Q96HJ3 373 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 MYH4Q9Y623 1939 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 DPEP1P16444 411 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 TPM4P67936 248 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CERKLQ49MI3 558 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SPATA20Q8TB22 786 aa16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PRMT6Q96LA8 375 aaPredicted RBP16.06■□□□□ 0.16
CDK5RAP1-202ENST00000346416 OFD1O75665 1012 aa16.05■□□□□ 0.16
CDK5RAP1-202ENST00000346416 KCNA3P22001 575 aa16.05■□□□□ 0.16
CDK5RAP1-202ENST00000346416 MYL5Q02045 173 aa16.05■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PAGE5Q96GU1 130 aa16.05■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PSMD1Q99460 953 aa16.05■□□□□ 0.16
CDK5RAP1-202ENST00000346416 TRIM34Q9BYJ4 488 aa16.05■□□□□ 0.16
CDK5RAP1-202ENST00000346416 hCG_1984214I3L0E3 225 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 LONP1P36776 959 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 AFMP43652 599 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 MORC3Q14149 939 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SHROOM1Q2M3G4 852 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CCDC144BQ3MJ40 725 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PPP4R3BQ5MIZ7 849 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 KRT25Q7Z3Z0 450 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SH3RF1Q7Z6J0 888 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ZNF713Q8N859 430 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SLC16A10Q8TF71 515 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 HSD3B7Q9H2F3 369 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ESYT2A0FGR8 921 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 LMOD1P29536 600 aaPredicted RBP16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 NONOQ15233 471 aaKnown RBP eCLIP16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 GPATCH4Q5T3I0 446 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 TTBK2Q6IQ55 1244 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 TATDN1Q6P1N9 297 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ADGRF4Q8IZF3 695 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 TRIML1Q8N9V2 468 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 COA7Q96BR5 231 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 TMEM60Q9H2L4 133 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
CDK5RAP1-202ENST00000346416 RAD17O75943 681 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SMC2O95347 1197 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 E2F4Q16254 413 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CCDC96Q2M329 555 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 DTHD1Q6ZMT9 781 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 REXO1Q8N1G1 1221 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 LARGE2Q8N3Y3 721 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 IQUBQ8NA54 791 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 MLKLQ8NB16 471 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 KANSL2Q9H9L4 492 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ZNF277Q9NRM2 450 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PYCARDQ9ULZ3 195 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ENTPD3O75355 529 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 EEF2P13639 858 aaKnown RBP16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CDC25AP30304 524 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 RSBN1LQ6PCB5 846 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 KCTD1Q719H9 257 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 C17orf53Q8N3J3 647 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 KIAA1524Q8TCG1 905 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 IFNKQ9P0W0 207 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 BIN2Q9UBW5 565 aaPredicted RBP16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PSME4Q14997 1843 aa16.03■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ATRNL1Q5VV63 1379 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 PNMA6FA0A0J9YX94 578 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 LAD1O00515 517 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 ATP1A3P13637 1013 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 CASP1P29466 404 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 SLC16A2P36021 539 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 LRMPQ12912 555 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 NOLC1Q14978 699 aaKnown RBP eCLIP16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 LETM2Q2VYF4 491 aa16.02■□□□□ 0.16
CDK5RAP1-202ENST00000346416 MKL1Q969V6 931 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms