RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 NLRP3Q96P20 1036 aa21.18■□□□□ 0.98
HDAC4-201ENST00000345617 RASGRF2O14827 1237 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 PLS1Q14651 629 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 ANKRD42Q8N9B4 389 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 BLMP54132 1417 aaPredicted RBP21.17■□□□□ 0.98
HDAC4-201ENST00000345617 TRIM50Q86XT4 487 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 DAAM1Q9Y4D1 1078 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 EXOC5O00471 708 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 NUB1Q9Y5A7 615 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 HADHQ16836 314 aaKnown RBP21.17■□□□□ 0.98
HDAC4-201ENST00000345617 KRT80Q6KB66 452 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 ANKRD35Q8N283 1001 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 ARHGEF9O43307 516 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 SRGAP2BP0DMP2 458 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 CCDC92Q53HC0 331 aaPredicted RBP21.17■□□□□ 0.98
HDAC4-201ENST00000345617 TMCO5AQ8N6Q1 288 aa21.17■□□□□ 0.98
HDAC4-201ENST00000345617 PDE6CP51160 858 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 NOP53Q9NZM5 478 aaKnown RBP21.16■□□□□ 0.98
HDAC4-201ENST00000345617 INHBAP08476 426 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 EXOC3O60645 756 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 CA8P35219 290 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 ADCY7P51828 1080 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 CDC23Q9UJX2 597 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 TRAPPC8Q9Y2L5 1435 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 TRIM60Q495X7 471 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 C16orf87Q6PH81 154 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 MAST3O60307 1309 aa21.16■□□□□ 0.98
HDAC4-201ENST00000345617 COL17A1Q9UMD9 1497 aaPredicted RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 OLFM3Q96PB7 478 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 AKAP4Q5JQC9 854 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 PSMB7Q99436 277 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 RAB44Q7Z6P3 723 aaPredicted RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 XAGE3Q8WTP9 111 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 RIOK1Q9BRS2 568 aaKnown RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 CUEDC2Q9H467 287 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 METTL14Q9HCE5 456 aaKnown RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 IQSEC3Q9UPP2 1182 aaPredicted RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 MYL1P05976 194 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 RAP1GDS1P52306 607 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 PUM3Q15397 648 aaKnown RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 GRAMD4Q6IC98 578 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 LRRC43Q8N309 656 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 HERC4Q5GLZ8 1057 aaPredicted RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 ARHGAP18Q8N392 663 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 ZFXP17010 805 aaPredicted RBP21.15■□□□□ 0.98
HDAC4-201ENST00000345617 PIK3AP1Q6ZUJ8 805 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 HACE1Q8IYU2 909 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 USP6NLQ92738 828 aa21.15■□□□□ 0.98
HDAC4-201ENST00000345617 TMEM232C9JQI7 657 aa21.14■□□□□ 0.98
HDAC4-201ENST00000345617 C6orf118Q5T5N4 469 aa21.14■□□□□ 0.98
HDAC4-201ENST00000345617 FAM207AQ9NSI2 230 aaPredicted RBP21.14■□□□□ 0.97
HDAC4-201ENST00000345617 EEF1GP26641 437 aaKnown RBP21.14■□□□□ 0.97
HDAC4-201ENST00000345617 STX1BP61266 288 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 PCDHB13Q9Y5F0 798 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 MYH6P13533 1939 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 CACNA1FO60840 1977 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 NR1H3Q13133 447 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 CCDC138Q96M89 665 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 TAB2Q9NYJ8 693 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 SGSM2O43147 1006 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 HOXB7P09629 217 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 SLFN12Q8IYM2 578 aa21.14■□□□□ 0.97
HDAC4-201ENST00000345617 UPF3AQ9H1J1 476 aaKnown RBP21.14■□□□□ 0.97
HDAC4-201ENST00000345617 LAD1O00515 517 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 POLR2BP30876 1174 aaKnown RBP21.13■□□□□ 0.97
HDAC4-201ENST00000345617 PPP1R13BQ96KQ4 1090 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 PNMA2Q9UL42 364 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 PHF8Q9UPP1 1060 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 SIRT1Q96EB6 747 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 IPO5O00410 1097 aaKnown RBP21.13■□□□□ 0.97
HDAC4-201ENST00000345617 EMBQ6PCB8 327 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 SYNMO15061 1565 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 TAF11Q15544 211 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 C17orf53Q8N3J3 647 aaPredicted RBP21.13■□□□□ 0.97
HDAC4-201ENST00000345617 MYCT1Q8N699 235 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 IFT122Q9HBG6 1241 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 C1orf112Q9NSG2 853 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 NPC1L1Q9UHC9 1359 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 SHANK2Q9UPX8 1470 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 HOOK2Q96ED9 719 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 SAAL1Q96ER3 474 aa21.13■□□□□ 0.97
HDAC4-201ENST00000345617 AKNAD1Q5T1N1 836 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 LSM14BQ9BX40 385 aaKnown RBP21.12■□□□□ 0.97
HDAC4-201ENST00000345617 FAM96AQ9H5X1 160 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 ADKP55263 362 aaKnown RBP21.12■□□□□ 0.97
HDAC4-201ENST00000345617 CTNND1O60716 968 aaKnown RBP21.12■□□□□ 0.97
HDAC4-201ENST00000345617 S100BP04271 92 aaPredicted RBP21.12■□□□□ 0.97
HDAC4-201ENST00000345617 BPIFB4P59827 614 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 CHST3Q7LGC8 479 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 POLR3CQ9BUI4 534 aaPredicted RBP21.12■□□□□ 0.97
HDAC4-201ENST00000345617 CD2APQ9Y5K6 639 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 COPG1Q9Y678 874 aaKnown RBP21.12■□□□□ 0.97
HDAC4-201ENST00000345617 USHBP1Q8N6Y0 703 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 IFNB1P01574 187 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 NSFP46459 744 aaKnown RBP21.12■□□□□ 0.97
HDAC4-201ENST00000345617 TCP11Q8WWU5 503 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 TMCO4Q5TGY1 634 aa21.12■□□□□ 0.97
HDAC4-201ENST00000345617 TEKT2Q9UIF3 430 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms