RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 DGKZQ13574 1117 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 FAM83BQ5T0W9 1011 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 CHST3Q7LGC8 479 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 FAM160B2Q86V87 743 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 MB21D1Q8N884 522 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 PRPF38AQ8NAV1 312 aaKnown RBP13.85□□□□□ -0.19
SNCA-202ENST00000345009 P2RX7Q99572 595 aaKnown RBP13.85□□□□□ -0.19
SNCA-202ENST00000345009 TM6SF1Q9BZW5 370 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 MTMR7Q9Y216 660 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 CYP46A1Q9Y6A2 500 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 MYPNQ86TC9 1320 aa13.85□□□□□ -0.19
SNCA-202ENST00000345009 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 GPR25O00155 361 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 FOXN1O15353 648 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 FKTNO75072 461 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
SNCA-202ENST00000345009 STAT2P52630 851 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 CCNA1P78396 465 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 SP3Q02447 781 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 SEC23AQ15436 765 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 CCDC96Q2M329 555 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 GPATCH4Q5T3I0 446 aaKnown RBP13.84□□□□□ -0.19
SNCA-202ENST00000345009 CCAR1Q8IX12 1150 aaKnown RBP13.84□□□□□ -0.19
SNCA-202ENST00000345009 IGDCC4Q8TDY8 1250 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 SLF1Q9BQI6 1058 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 PTPRFP10586 1907 aa13.84□□□□□ -0.19
SNCA-202ENST00000345009 GREB1LQ9C091 1923 aaPredicted RBP13.84□□□□□ -0.19
SNCA-202ENST00000345009 TMEM232C9JQI7 657 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 PLA2G6O60733 806 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 CALM1P0DP23 149 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 CALM2P0DP24 149 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 CALM3P0DP25 149 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 EXOSC10Q01780 885 aaKnown RBP13.83□□□□□ -0.2
SNCA-202ENST00000345009 ADCK5Q3MIX3 580 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 KIAA1755Q5JYT7 1200 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 C17orf99Q6UX52 265 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 LBX2Q6XYB7 198 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 GPRC5AQ8NFJ5 357 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 ERO1AQ96HE7 468 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 CPA4Q9UI42 421 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 RABGAP1Q9Y3P9 1069 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 SLC12A7Q9Y666 1083 aa13.83□□□□□ -0.2
SNCA-202ENST00000345009 MYH4Q9Y623 1939 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 SH2B2O14492 632 aaPredicted RBP13.82□□□□□ -0.2
SNCA-202ENST00000345009 ZBED4O75132 1171 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 PARP1P09874 1014 aaKnown RBP13.82□□□□□ -0.2
SNCA-202ENST00000345009 HSPA8P11142 646 aaKnown RBP13.82□□□□□ -0.2
SNCA-202ENST00000345009 PDHBP11177 359 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 KIF5BP33176 963 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 LBX1P52954 281 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 ANTXR2P58335 489 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 FAM110CQ1W6H9 321 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 ASPRV1Q53RT3 343 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 RUFY3Q7L099 469 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 ANKRD13CQ8N6S4 541 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 NKX2-3Q8TAU0 364 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 NUP88Q99567 741 aaPredicted RBP13.82□□□□□ -0.2
SNCA-202ENST00000345009 ZSWIM6Q9HCJ5 1215 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 TSKSQ9UJT2 592 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 PNMA2Q9UL42 364 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 PPP1R9AQ9ULJ8 1098 aa13.82□□□□□ -0.2
SNCA-202ENST00000345009 DDAH1O94760 285 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 RPS6KB1P23443 525 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 ZNF543Q08ER8 600 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 KCTD1Q719H9 257 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 IL27Q8NEV9 243 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 CTCFLQ8NI51 663 aaPredicted RBP13.81□□□□□ -0.2
SNCA-202ENST00000345009 ZNF296Q8WUU4 475 aaPredicted RBP13.81□□□□□ -0.2
SNCA-202ENST00000345009 KIFC2Q96AC6 838 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 CHMP4CQ96CF2 233 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 MAP3K14Q99558 947 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 PAGR1Q9BTK6 254 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 C22orf23Q9BZE7 217 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 R3HDMLQ9H3Y0 253 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 LY9Q9HBG7 655 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
SNCA-202ENST00000345009 PRDM10Q9NQV6 1147 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 LOC285556D6RIA3 1793 aa13.81□□□□□ -0.2
SNCA-202ENST00000345009 SPDYE16A6NNV3 312 aaPredicted RBP13.8□□□□□ -0.2
SNCA-202ENST00000345009 VWA5AO00534 786 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 GNRH1P01148 92 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 SNHG28P0DPA3 235 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 BCRP11274 1271 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 HOXD10P28358 340 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 COPB2P35606 906 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 GNAQP50148 359 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 SGMS1Q86VZ5 419 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 FBXL16Q8N461 479 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 NUP133Q8WUM0 1156 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 LZTS2Q9BRK4 669 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 LRRC2Q9BYS8 371 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 GPCPD1Q9NPB8 672 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 RBPJLQ9UBG7 517 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 MORF4L1Q9UBU8 362 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 ADAMTS5Q9UNA0 930 aa13.8□□□□□ -0.2
SNCA-202ENST00000345009 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
SNCA-202ENST00000345009 MAPK4P31152 587 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 OAZ1P54368 228 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 FCGRTP55899 365 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 ERVK-9P63128 1117 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms