RNA–Protein interactions for RNA: ENST00000344791.6

LYSMD4-202, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LYSMD4, Length 2,885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-202ENST00000344791 SLC35G1Q2M3R5 365 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 PARD6BQ9BYG5 372 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 EP400Q96L91 3159 aa21.58■■□□□ 1.05
LYSMD4-202ENST00000344791 PCP11498 1178 aaKnown RBP21.58■■□□□ 1.04
LYSMD4-202ENST00000344791 KRT9P35527 623 aa21.58■■□□□ 1.04
LYSMD4-202ENST00000344791 DTHD1Q6ZMT9 781 aa21.58■■□□□ 1.04
LYSMD4-202ENST00000344791 ZNF444Q8N0Y2 327 aaPredicted RBP21.58■■□□□ 1.04
LYSMD4-202ENST00000344791 SLC35F6Q8N357 371 aa21.58■■□□□ 1.04
LYSMD4-202ENST00000344791 SASH3O75995 380 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 UBA7P41226 1012 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 TCP11X2Q5H9J9 407 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 CHP1Q99653 195 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 PCDHA4Q9UN74 947 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 C12orf60Q5U649 245 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 CNGA4Q8IV77 575 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 ANKRD2Q9GZV1 360 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 TRIM10Q9UDY6 481 aa21.57■■□□□ 1.04
LYSMD4-202ENST00000344791 LETM2Q2VYF4 491 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 DISC1Q9NRI5 854 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 ABHD10Q9NUJ1 306 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 MAD2L2Q9UI95 211 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 SEMA3EO15041 775 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 ERCC3P19447 782 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 ZNF658Q5TYW1 1059 aaPredicted RBP21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 ANKRD20A12PQ8NF67 263 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 NYXQ9GZU5 481 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 RNF216Q9NWF9 866 aaPredicted RBP21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 NARFQ9UHQ1 456 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 RWDD2AQ9UIY3 292 aa21.56■■□□□ 1.04
LYSMD4-202ENST00000344791 CALML3P27482 149 aa21.55■■□□□ 1.04
LYSMD4-202ENST00000344791 PCDHA6Q9UN73 950 aa21.55■■□□□ 1.04
LYSMD4-202ENST00000344791 PCDHA8Q9Y5H6 950 aa21.55■■□□□ 1.04
LYSMD4-202ENST00000344791 ZRANB2O95218 330 aaKnown RBP eCLIP21.55■■□□□ 1.04
LYSMD4-202ENST00000344791 C4orf32Q8N8J7 132 aa21.55■■□□□ 1.04
LYSMD4-202ENST00000344791 TRIM47Q96LD4 638 aa21.55■■□□□ 1.04
LYSMD4-202ENST00000344791 FAM53CQ9NYF3 392 aa21.55■■□□□ 1.04
LYSMD4-202ENST00000344791 RHOXF2BP0C7M4 288 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 CHMP4BP1P59074 171 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 NAALADL2Q58DX5 795 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 USP17L2Q6R6M4 530 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 GOLGA1Q92805 767 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 ARHGEF1Q92888 912 aaKnown RBP21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 RHOXF2Q9BQY4 288 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 GUCA1BQ9UMX6 200 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 A0A1B0GUL6 1792 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 TRAPPC10P48553 1259 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 SLC10A5Q5PT55 438 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 CC2D1AQ6P1N0 951 aaPredicted RBP21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 LRRC15Q8TF66 581 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 HPS3Q969F9 1004 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 TMEM47Q9BQJ4 181 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 CCNL1Q9UK58 526 aaPredicted RBP21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 MYH8P13535 1937 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 CCNT1O60563 726 aaKnown RBP21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 KIF20AO95235 890 aa21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 PARP1P09874 1014 aaKnown RBP21.54■■□□□ 1.04
LYSMD4-202ENST00000344791 LONP1P36776 959 aaKnown RBP21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 GYS2P54840 703 aa21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 NAPAP54920 295 aa21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 SBK1Q52WX2 424 aa21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 CCDC178Q5BJE1 867 aa21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 NGLY1Q96IV0 654 aa21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 RTCBQ9Y3I0 505 aaKnown RBP21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 KLRF2D3W0D1 207 aa21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 TM4SF1P30408 202 aa21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 AMOTL1Q8IY63 956 aa21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 GPR161Q8N6U8 529 aaKnown RBP21.53■■□□□ 1.04
LYSMD4-202ENST00000344791 TBC1D8O95759 1140 aa21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 EIF6P56537 245 aaKnown RBP21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 UIMC1Q96RL1 719 aa21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 NAA15Q9BXJ9 866 aaKnown RBP21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 UBA5Q9GZZ9 404 aa21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 LIMA1Q9UHB6 759 aaKnown RBP21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 TTC26A0AVF1 554 aa21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 ENC1O14682 589 aa21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 RSRC2Q7L4I2 434 aaKnown RBP21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 IRF2BP1Q8IU81 584 aa21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 ARFGAP3Q9NP61 516 aa21.52■■□□□ 1.04
LYSMD4-202ENST00000344791 KLK7P49862 253 aa21.51■■□□□ 1.03
LYSMD4-202ENST00000344791 SPTY2D1Q68D10 685 aaPredicted RBP21.51■■□□□ 1.03
LYSMD4-202ENST00000344791 DGKHQ86XP1 1220 aa21.51■■□□□ 1.03
LYSMD4-202ENST00000344791 PCMTD1Q96MG8 357 aaPredicted RBP21.51■■□□□ 1.03
LYSMD4-202ENST00000344791 RMND1Q9NWS8 449 aa21.51■■□□□ 1.03
LYSMD4-202ENST00000344791 SCN7AQ01118 1682 aa21.51■■□□□ 1.03
LYSMD4-202ENST00000344791 CTAGE9A4FU28 777 aa21.51■■□□□ 1.03
LYSMD4-202ENST00000344791 SUGCTQ9HAC7 445 aa21.51■■□□□ 1.03
LYSMD4-202ENST00000344791 B4DLN1 442 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 RPS6KA4O75676 772 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 TECP42680 631 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 JAKMIP3Q5VZ66 844 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 ARL6IP4Q66PJ3 421 aaKnown RBP21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 NKRFO15226 690 aaKnown RBP eCLIP21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 PLCG1P19174 1290 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 RFC4P35249 363 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 GRM4Q14833 912 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 TXNRD1Q16881 649 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 MKRN1Q9UHC7 482 aaKnown RBP21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 STXBP3O00186 592 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 BAG3O95817 575 aa21.5■■□□□ 1.03
LYSMD4-202ENST00000344791 BTDP43251 543 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms