RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 MMGT1Q8N4V1 131 aa9.09□□□□□ -0.95
ATG4A-201ENST00000343524 MYCBPAPQ8TBZ2 947 aa9.09□□□□□ -0.95
ATG4A-201ENST00000343524 ZNF526Q8TF50 670 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-201ENST00000343524 PTCD2Q8WV60 388 aaKnown RBP9.09□□□□□ -0.95
ATG4A-201ENST00000343524 CDC5LQ99459 802 aaKnown RBP9.09□□□□□ -0.95
ATG4A-201ENST00000343524 EBF2Q9HAK2 575 aa9.09□□□□□ -0.95
ATG4A-201ENST00000343524 CORO1CQ9ULV4 474 aaPredicted RBP9.09□□□□□ -0.95
ATG4A-201ENST00000343524 PEAK1Q9H792 1746 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 GOLGA6L10A0A0M3HER8 536 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 MGRN1O60291 552 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 KRT83P78385 493 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 SPAG1Q07617 926 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 PNOCQ13519 176 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 RIPK1Q13546 671 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 EIF4A2Q14240 407 aaKnown RBP9.08□□□□□ -0.96
ATG4A-201ENST00000343524 GLE1Q53GS7 698 aaKnown RBP9.08□□□□□ -0.96
ATG4A-201ENST00000343524 C6orf89Q6UWU4 347 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 CD302Q8IX05 232 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 CCDC170Q8IYT3 715 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 RPUSD2Q8IZ73 545 aaKnown RBP9.08□□□□□ -0.96
ATG4A-201ENST00000343524 DRAXINQ8NBI3 349 aaPredicted RBP9.08□□□□□ -0.96
ATG4A-201ENST00000343524 TRIM58Q8NG06 486 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 RASSF8Q8NHQ8 419 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 LMBR1Q8WVP7 490 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 KIF9Q9HAQ2 790 aa9.08□□□□□ -0.96
ATG4A-201ENST00000343524 TPX2Q9ULW0 747 aaKnown RBP9.08□□□□□ -0.96
ATG4A-201ENST00000343524 KRT86O43790 486 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 HOXB7P09629 217 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 NR1D1P20393 614 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 PBX1P40424 430 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 FOSBP53539 338 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 FOXK1P85037 733 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 ATP2B2Q01814 1243 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 RBL2Q08999 1139 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 ANKRD20A8PQ5CZ79 823 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 ZC3H12AQ5D1E8 599 aaKnown RBP9.07□□□□□ -0.96
ATG4A-201ENST00000343524 ZNF572Q7Z3I7 529 aaPredicted RBP9.07□□□□□ -0.96
ATG4A-201ENST00000343524 METTL16Q86W50 562 aaKnown RBP9.07□□□□□ -0.96
ATG4A-201ENST00000343524 CCT8L2Q96SF2 557 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 SBF2Q86WG5 1849 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 GOLGA6L10A6NI86 522 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 ABLIM1O14639 778 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 GSTA1P08263 222 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 MDH1P40925 334 aaKnown RBP9.07□□□□□ -0.96
ATG4A-201ENST00000343524 LMNB2Q03252 620 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 IFT88Q13099 833 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 POSTNQ15063 836 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 SPATA1Q5VX52 437 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 NLGN2Q8NFZ4 835 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 CUL5Q93034 780 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 JAKMIP2Q96AA8 810 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 TSGA10Q9BZW7 698 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 PRDM11Q9NQV5 511 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 ABHD10Q9NUJ1 306 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 PCDHA5Q9Y5H7 936 aa9.07□□□□□ -0.96
ATG4A-201ENST00000343524 SYNRGQ9UMZ2 1314 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 CFAP73A6NFT4 308 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 PDHBP11177 359 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 FERP16591 822 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 RAB27AP51159 221 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 VAV2P52735 878 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 GUCY1B3Q02153 619 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 MORC3Q14149 939 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 TSR1Q2NL82 804 aaKnown RBP9.06□□□□□ -0.96
ATG4A-201ENST00000343524 TTMPQ5BVD1 217 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 CFAP58Q5T655 872 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 SLC30A9Q6PML9 568 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 ZNF589Q86UQ0 364 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-201ENST00000343524 ACRBPQ8NEB7 543 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.06□□□□□ -0.96
ATG4A-201ENST00000343524 DTNBP1Q96EV8 351 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 CYFIP2Q96F07 1278 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 MMS19Q96T76 1030 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 DSCC1Q9BVC3 393 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 EHD4Q9H223 541 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 KDM4CQ9H3R0 1056 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 GPHNQ9NQX3 736 aaPredicted RBP9.06□□□□□ -0.96
ATG4A-201ENST00000343524 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.06□□□□□ -0.96
ATG4A-201ENST00000343524 IRAK4Q9NWZ3 460 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 NOP53Q9NZM5 478 aaKnown RBP9.06□□□□□ -0.96
ATG4A-201ENST00000343524 MAN1B1Q9UKM7 699 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 KCNH3Q9ULD8 1083 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 C15orf41Q9Y2V0 281 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 RIPOR2Q9Y4F9 1068 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 SH3TC1Q8TE82 1336 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 TNS2Q63HR2 1409 aa9.06□□□□□ -0.96
ATG4A-201ENST00000343524 SMNDC1O75940 238 aaKnown RBP eCLIP9.05□□□□□ -0.96
ATG4A-201ENST00000343524 TOMM70O94826 608 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 ATP6V1G2O95670 118 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 CYP21A2P08686 494 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 PDIA3P30101 505 aaKnown RBP9.05□□□□□ -0.96
ATG4A-201ENST00000343524 CASP14P31944 242 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 KIF23Q02241 960 aaPredicted RBP9.05□□□□□ -0.96
ATG4A-201ENST00000343524 G3BP1Q13283 466 aaKnown RBP eCLIP9.05□□□□□ -0.96
ATG4A-201ENST00000343524 E2F5Q15329 346 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 TXNRD1Q16881 649 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 MCMDC2Q4G0Z9 681 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 TTC39AQ5SRH9 613 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 HDGFL1Q5TGJ6 251 aa9.05□□□□□ -0.96
ATG4A-201ENST00000343524 NME9Q86XW9 330 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms