RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 DHX36Q9H2U1 1008 aaKnown RBP21.22■□□□□ 0.99
HOXA9-201ENST00000343483 CCDC194A0A1B0GVG4 234 aa21.21■□□□□ 0.99
HOXA9-201ENST00000343483 DDTLA6NHG4 134 aaPredicted RBP21.21■□□□□ 0.99
HOXA9-201ENST00000343483 FAM196BA6NMK8 535 aa21.21■□□□□ 0.99
HOXA9-201ENST00000343483 CDC25BP30305 580 aa21.21■□□□□ 0.99
HOXA9-201ENST00000343483 NAPAP54920 295 aa21.21■□□□□ 0.99
HOXA9-201ENST00000343483 ATP2B2Q01814 1243 aa21.21■□□□□ 0.99
HOXA9-201ENST00000343483 RTKN2Q8IZC4 609 aa21.21■□□□□ 0.99
HOXA9-201ENST00000343483 HOOK1Q9UJC3 728 aaKnown RBP21.21■□□□□ 0.99
HOXA9-201ENST00000343483 TUBE1Q9UJT0 475 aa21.21■□□□□ 0.99
HOXA9-201ENST00000343483 BCS1LQ9Y276 419 aa21.21■□□□□ 0.99
HOXA9-201ENST00000343483 ATP2C1P98194 919 aaPredicted RBP21.2■□□□□ 0.99
HOXA9-201ENST00000343483 GALNT17Q6IS24 598 aa21.2■□□□□ 0.99
HOXA9-201ENST00000343483 PIGSQ96S52 555 aa21.2■□□□□ 0.99
HOXA9-201ENST00000343483 TDRD3Q9H7E2 651 aaKnown RBP21.2■□□□□ 0.99
HOXA9-201ENST00000343483 DNAJC18Q9H819 358 aa21.2■□□□□ 0.99
HOXA9-201ENST00000343483 NRBP1Q9UHY1 535 aa21.2■□□□□ 0.99
HOXA9-201ENST00000343483 VWA3AA6NCI4 1184 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 FOXN1O15353 648 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 CFAP100Q494V2 611 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 ASPRV1Q53RT3 343 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 DAGLBQ8NCG7 672 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 EPSTI1Q96J88 318 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 TRIM34Q9BYJ4 488 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 PI4KBQ9UBF8 816 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 SERTAD1Q9UHV2 236 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 PCDHA6Q9UN73 950 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 PCDHA8Q9Y5H6 950 aa21.2■□□□□ 0.98
HOXA9-201ENST00000343483 M0R2N6 131 aa21.19■□□□□ 0.98
HOXA9-201ENST00000343483 SMARCA1P28370 1054 aa21.19■□□□□ 0.98
HOXA9-201ENST00000343483 GRIPAP1Q4V328 841 aa21.19■□□□□ 0.98
HOXA9-201ENST00000343483 CCDC12Q8WUD4 166 aaPredicted RBP21.19■□□□□ 0.98
HOXA9-201ENST00000343483 ZNF277Q9NRM2 450 aaPredicted RBP21.19■□□□□ 0.98
HOXA9-201ENST00000343483 SH3BP5LQ7L8J4 393 aa21.19■□□□□ 0.98
HOXA9-201ENST00000343483 LARGE2Q8N3Y3 721 aa21.19■□□□□ 0.98
HOXA9-201ENST00000343483 SYMPKQ92797 1274 aaKnown RBP21.19■□□□□ 0.98
HOXA9-201ENST00000343483 CCDC17Q96LX7 622 aa21.19■□□□□ 0.98
HOXA9-201ENST00000343483 GPCPD1Q9NPB8 672 aa21.19■□□□□ 0.98
HOXA9-201ENST00000343483 UQCRHLA0A096LP55 91 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 RAD17O75943 681 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 UQCRHP07919 91 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 POSTNQ15063 836 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 MRFAP1L1Q96HT8 127 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 PSMD1Q99460 953 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 BPIFA3Q9BQP9 254 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 PIM2Q9P1W9 311 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 PCDHA5Q9Y5H7 936 aa21.18■□□□□ 0.98
HOXA9-201ENST00000343483 ZNF646O15015 1829 aaPredicted RBP21.18■□□□□ 0.98
HOXA9-201ENST00000343483 SNHG28P0DPA3 235 aa21.17■□□□□ 0.98
HOXA9-201ENST00000343483 MDM2Q00987 491 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-201ENST00000343483 FOXP4Q8IVH2 680 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-201ENST00000343483 DHX58Q96C10 678 aa21.17■□□□□ 0.98
HOXA9-201ENST00000343483 ZMYND12Q9H0C1 365 aa21.17■□□□□ 0.98
HOXA9-201ENST00000343483 RIOX1Q9H6W3 641 aa21.17■□□□□ 0.98
HOXA9-201ENST00000343483 SMCO2A6NFE2 343 aa21.17■□□□□ 0.98
HOXA9-201ENST00000343483 ACTN4O43707 911 aaKnown RBP21.17■□□□□ 0.98
HOXA9-201ENST00000343483 INF2Q27J81 1249 aa21.17■□□□□ 0.98
HOXA9-201ENST00000343483 CERKLQ49MI3 558 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-201ENST00000343483 SOGA3Q5TF21 947 aa21.17■□□□□ 0.98
HOXA9-201ENST00000343483 ELOA2Q8IYF1 753 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-201ENST00000343483 GRAMD1CQ8IYS0 662 aa21.17■□□□□ 0.98
HOXA9-201ENST00000343483 FAM177A1Q8N128 213 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-201ENST00000343483 PRMT6Q96LA8 375 aaPredicted RBP21.17■□□□□ 0.98
HOXA9-201ENST00000343483 C6orf50Q9HD87 102 aa21.16■□□□□ 0.98
HOXA9-201ENST00000343483 MYH8P13535 1937 aa21.16■□□□□ 0.98
HOXA9-201ENST00000343483 A0A087X0B3 334 aa21.16■□□□□ 0.98
HOXA9-201ENST00000343483 NPM3O75607 178 aaKnown RBP21.16■□□□□ 0.98
HOXA9-201ENST00000343483 PRR29P0C7W0 189 aa21.16■□□□□ 0.98
HOXA9-201ENST00000343483 ZNF543Q08ER8 600 aa21.16■□□□□ 0.98
HOXA9-201ENST00000343483 LRMPQ12912 555 aa21.16■□□□□ 0.98
HOXA9-201ENST00000343483 CCDC96Q2M329 555 aa21.16■□□□□ 0.98
HOXA9-201ENST00000343483 SHROOM1Q2M3G4 852 aaPredicted RBP21.16■□□□□ 0.98
HOXA9-201ENST00000343483 RSBN1LQ6PCB5 846 aaPredicted RBP21.16■□□□□ 0.98
HOXA9-201ENST00000343483 RAD21O60216 631 aa21.15■□□□□ 0.98
HOXA9-201ENST00000343483 GNA11P29992 359 aa21.15■□□□□ 0.98
HOXA9-201ENST00000343483 CCDC144BQ3MJ40 725 aa21.15■□□□□ 0.98
HOXA9-201ENST00000343483 PPP4R3BQ5MIZ7 849 aa21.15■□□□□ 0.98
HOXA9-201ENST00000343483 KANK3Q6NY19 840 aa21.15■□□□□ 0.98
HOXA9-201ENST00000343483 PSMD14O00487 310 aa21.14■□□□□ 0.98
HOXA9-201ENST00000343483 IL17AQ16552 155 aa21.14■□□□□ 0.97
HOXA9-201ENST00000343483 DALRD3Q5D0E6 543 aaKnown RBP21.14■□□□□ 0.97
HOXA9-201ENST00000343483 CCDC34Q96HJ3 373 aa21.14■□□□□ 0.97
HOXA9-201ENST00000343483 ENTPD3O75355 529 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 ARL6IP4Q66PJ3 421 aaKnown RBP21.13■□□□□ 0.97
HOXA9-201ENST00000343483 KCTD1Q719H9 257 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 SMARCE1Q969G3 411 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 SLFN14P0C7P3 912 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 EEF2P13639 858 aaKnown RBP21.13■□□□□ 0.97
HOXA9-201ENST00000343483 TPM4P67936 248 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 GPATCH4Q5T3I0 446 aaKnown RBP21.13■□□□□ 0.97
HOXA9-201ENST00000343483 TTBK2Q6IQ55 1244 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 TATDN1Q6P1N9 297 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 KRT25Q7Z3Z0 450 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 ADGRF4Q8IZF3 695 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 C4orf32Q8N8J7 132 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 COA7Q96BR5 231 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 KANSL2Q9H9L4 492 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 TMOD2Q9NZR1 351 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 MAN1B1Q9UKM7 699 aa21.13■□□□□ 0.97
HOXA9-201ENST00000343483 ZBTB12Q9Y330 459 aaPredicted RBP21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms