RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 KRT83P78385 493 aa16.62■□□□□ 0.25
CLCN1-201ENST00000343257 HDLBPQ00341 1268 aaKnown RBP16.62■□□□□ 0.25
CLCN1-201ENST00000343257 E2F5Q15329 346 aa16.62■□□□□ 0.25
CLCN1-201ENST00000343257 MFSD6Q6ZSS7 791 aa16.62■□□□□ 0.25
CLCN1-201ENST00000343257 MS4A14Q96JA4 679 aa16.62■□□□□ 0.25
CLCN1-201ENST00000343257 SH3GL2Q99962 352 aa16.62■□□□□ 0.25
CLCN1-201ENST00000343257 EPB41L4AQ9HCS5 686 aaPredicted RBP16.62■□□□□ 0.25
CLCN1-201ENST00000343257 CCDC196A0A1B0GTZ2 297 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 FAM153BP0C7A2 387 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 PHKG2P15735 406 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 PDE6AP16499 860 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 SF3B2Q13435 895 aaKnown RBP16.61■□□□□ 0.25
CLCN1-201ENST00000343257 FAM153CQ494X1 144 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 TRIM47Q96LD4 638 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 SCLT1Q96NL6 688 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 UBAC1Q9BSL1 405 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 ZNHIT6Q9NWK9 470 aaKnown RBP16.61■□□□□ 0.25
CLCN1-201ENST00000343257 FAM153AQ9UHL3 310 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.61■□□□□ 0.25
CLCN1-201ENST00000343257 V9GY48 417 aaPredicted RBP16.61■□□□□ 0.25
CLCN1-201ENST00000343257 KIF5AQ12840 1032 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 B4GALNT4Q76KP1 1039 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 SGMS1Q86VZ5 419 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 IRF2BP1Q8IU81 584 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 SPATA4Q8NEY3 305 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 RWDD2AQ9UIY3 292 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 NFU1Q9UMS0 254 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 SLC4A4Q9Y6R1 1079 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 ERICH2A1L162 156 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 SEMA3EO15041 775 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 PDHBP11177 359 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 GPTP24298 496 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 CYLC1P35663 651 aaPredicted RBP16.61■□□□□ 0.25
CLCN1-201ENST00000343257 NAA35Q5VZE5 725 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 CREG2Q8IUH2 290 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 IFNL3Q8IZI9 196 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 ORAI2Q96SN7 254 aa16.61■□□□□ 0.25
CLCN1-201ENST00000343257 MINDY4BA8MYZ0 360 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 E7EVH7 732 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 SPAG1Q07617 926 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 TRIM14Q14142 442 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 TYW1BQ6NUM6 668 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 AMOTL1Q8IY63 956 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 TBX22Q9Y458 520 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 C4AP0C0L4 1744 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 C4BP0C0L5 1744 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 WDR19Q8NEZ3 1342 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 LTN1O94822 1766 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 NKRFO15226 690 aaKnown RBP eCLIP16.6■□□□□ 0.25
CLCN1-201ENST00000343257 TATP17735 454 aaPredicted RBP16.6■□□□□ 0.25
CLCN1-201ENST00000343257 LSP1P33241 339 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 PHKA1P46020 1223 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 MAGEB6Q8N7X4 407 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 MIGA1Q8NAN2 632 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 FANCBQ8NB91 859 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 PROCA1Q8NCQ7 364 aaPredicted RBP16.6■□□□□ 0.25
CLCN1-201ENST00000343257 MST1RQ04912 1400 aa16.6■□□□□ 0.25
CLCN1-201ENST00000343257 TSPOAP1O95153 1857 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 BAZ2BQ9UIF8 2168 aaKnown RBP16.59■□□□□ 0.25
CLCN1-201ENST00000343257 BUB1O43683 1085 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 CARSP49589 748 aaKnown RBP16.59■□□□□ 0.25
CLCN1-201ENST00000343257 TRADDQ15628 312 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 LDHAL6AQ6ZMR3 332 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 ZNF473Q8WTR7 871 aaKnown RBP16.59■□□□□ 0.25
CLCN1-201ENST00000343257 SLC24A3Q9HC58 644 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 CNNM1Q9NRU3 951 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 LRRC10BA6NIK2 292 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 RPN1P04843 607 aaKnown RBP16.59■□□□□ 0.25
CLCN1-201ENST00000343257 CFAP58Q5T655 872 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 ZNF654Q8IZM8 581 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 RPGRIP1Q96KN7 1286 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 STRBPQ96SI9 672 aaKnown RBP16.59■□□□□ 0.25
CLCN1-201ENST00000343257 KLC4Q9NSK0 619 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 MAGEC2Q9UBF1 373 aaPredicted RBP16.59■□□□□ 0.25
CLCN1-201ENST00000343257 NF2P35240 595 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 KRT2P35908 639 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 TBC1D8BQ0IIM8 1120 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 PPP2R5AQ15172 486 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 MAATS1Q7Z4T9 603 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 CCDC114Q96M63 670 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 CCDC42Q96M95 316 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 BCCIPQ9P287 314 aaKnown RBP eCLIP16.59■□□□□ 0.25
CLCN1-201ENST00000343257 SNX12Q9UMY4 172 aa16.59■□□□□ 0.25
CLCN1-201ENST00000343257 KDM6AO15550 1401 aaPredicted RBP16.58■□□□□ 0.25
CLCN1-201ENST00000343257 ZNF263O14978 683 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 LIFRP42702 1097 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 IFIT5Q13325 482 aaKnown RBP16.58■□□□□ 0.24
CLCN1-201ENST00000343257 TTC38Q5R3I4 469 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 IQCEQ6IPM2 695 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 C8orf74Q6P047 294 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 PIK3AP1Q6ZUJ8 805 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 RBM12Q9NTZ6 932 aaKnown RBP16.58■□□□□ 0.24
CLCN1-201ENST00000343257 TBC1D2BQ9UPU7 963 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 STK36Q9NRP7 1315 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 PP2D1A8MPX8 630 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 PLEKHA8P1O95397 391 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 PDE6BP35913 854 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 SPA17Q15506 151 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 CCDC40Q4G0X9 1142 aa16.58■□□□□ 0.24
CLCN1-201ENST00000343257 AKNAD1Q5T1N1 836 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms