RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 RWDD2AQ9UIY3 292 aa17.05■□□□□ 0.32
SNX18-202ENST00000343017 STK36Q9NRP7 1315 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 ECM29Q5VYK3 1845 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 ESYT3A0FGR9 886 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 SMIM22K7EJ46 135 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 SSBP05455 408 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNX18-202ENST00000343017 SETQ01105 290 aaPredicted RBP17.04■□□□□ 0.32
SNX18-202ENST00000343017 NFRKBQ6P4R8 1299 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.04■□□□□ 0.32
SNX18-202ENST00000343017 NHEJ1Q9H9Q4 299 aaPredicted RBP17.04■□□□□ 0.32
SNX18-202ENST00000343017 LRWD1Q9UFC0 647 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 ZSCAN5CA6NGD5 496 aaPredicted RBP17.04■□□□□ 0.32
SNX18-202ENST00000343017 NCK2O43639 380 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 ZPR1O75312 459 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 CABP4P57796 275 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 IFNL2Q8IZJ0 200 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 DNAJC7Q99615 494 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 CAPN6Q9Y6Q1 641 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 KAT6BQ8WYB5 2073 aa17.04■□□□□ 0.32
SNX18-202ENST00000343017 B4DLN1 442 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 CIAO1O76071 339 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 DEXIO95424 95 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 FAM153BP0C7A2 387 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 IFT88Q13099 833 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 FAM153CQ494X1 144 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 SPATA4Q8NEY3 305 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 FAM89AQ96GI7 184 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 FAM153AQ9UHL3 310 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 WDR17Q8IZU2 1322 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 ZNF263O14978 683 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 NKRFO15226 690 aaKnown RBP eCLIP17.03■□□□□ 0.32
SNX18-202ENST00000343017 OPA1O60313 960 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 LIFRP42702 1097 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 DNA2P51530 1060 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 PTGDRQ13258 359 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 TRIM14Q14142 442 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 ANKRD13CQ8N6S4 541 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 RPGRIP1Q96KN7 1286 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 NAA35Q5VZE5 725 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 TICAM2Q86XR7 235 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 AMOTL1Q8IY63 956 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 GIMAP7Q8NHV1 300 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 STRBPQ96SI9 672 aaKnown RBP17.03■□□□□ 0.32
SNX18-202ENST00000343017 ARMT1Q9H993 441 aa17.03■□□□□ 0.32
SNX18-202ENST00000343017 HSF2BPO75031 334 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 MOCS3O95396 460 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 PDE6AP16499 860 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 LSP1P33241 339 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 KRT83P78385 493 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 WTAPQ15007 396 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 B4GALNT4Q76KP1 1039 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 PCMTD1Q96MG8 357 aaPredicted RBP17.02■□□□□ 0.32
SNX18-202ENST00000343017 PLIN2Q99541 437 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 NAPBQ9H115 298 aa17.02■□□□□ 0.32
SNX18-202ENST00000343017 RASSF10A6NK89 507 aa17.02■□□□□ 0.31
SNX18-202ENST00000343017 HDLBPQ00341 1268 aaKnown RBP17.02■□□□□ 0.31
SNX18-202ENST00000343017 CCDC96Q2M329 555 aa17.02■□□□□ 0.31
SNX18-202ENST00000343017 CCDC70Q6NSX1 233 aa17.02■□□□□ 0.31
SNX18-202ENST00000343017 IFNL3Q8IZI9 196 aa17.02■□□□□ 0.31
SNX18-202ENST00000343017 KIRREL3Q8IZU9 778 aa17.02■□□□□ 0.31
SNX18-202ENST00000343017 FANCBQ8NB91 859 aa17.02■□□□□ 0.31
SNX18-202ENST00000343017 CAPN11Q9UMQ6 739 aa17.02■□□□□ 0.31
SNX18-202ENST00000343017 TBC1D2BQ9UPU7 963 aa17.02■□□□□ 0.31
SNX18-202ENST00000343017 TRIM21P19474 475 aaKnown RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 NAP1L1P55209 391 aaKnown RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 SPAG1Q07617 926 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 METTL24Q5JXM2 366 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 IFT81Q8WYA0 676 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 MS4A14Q96JA4 679 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 CCDC43Q96MW1 224 aaKnown RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 SNX12Q9UMY4 172 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 BAZ2BQ9UIF8 2168 aaKnown RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 BACH1O14867 736 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 ADAMTS3O15072 1205 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 FSBPO95073 299 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 GUCY2FP51841 1108 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 SKOR1P84550 965 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 SF3B2Q13435 895 aaKnown RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 TRADDQ15628 312 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 MYO5AQ9Y4I1 1855 aaKnown RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 MBD4O95243 580 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 CARSP49589 748 aaKnown RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 IL17AQ16552 155 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 CEP57Q86XR8 500 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 MMGT1Q8N4V1 131 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 ZNF473Q8WTR7 871 aaKnown RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 KLC4Q9NSK0 619 aa17.01■□□□□ 0.31
SNX18-202ENST00000343017 V9GY48 417 aaPredicted RBP17.01■□□□□ 0.31
SNX18-202ENST00000343017 FRMD3A2A2Y4 597 aa17■□□□□ 0.31
SNX18-202ENST00000343017 ZNF233A6NK53 670 aa17■□□□□ 0.31
SNX18-202ENST00000343017 KIF5AQ12840 1032 aa17■□□□□ 0.31
SNX18-202ENST00000343017 HAUS3Q68CZ6 603 aa17■□□□□ 0.31
SNX18-202ENST00000343017 MFSD6Q6ZSS7 791 aa17■□□□□ 0.31
SNX18-202ENST00000343017 DHX37Q8IY37 1157 aaKnown RBP17■□□□□ 0.31
SNX18-202ENST00000343017 ZNF507Q8TCN5 953 aa17■□□□□ 0.31
SNX18-202ENST00000343017 N4BP2L2Q92802 583 aaPredicted RBP17■□□□□ 0.31
SNX18-202ENST00000343017 NFU1Q9UMS0 254 aa17■□□□□ 0.31
SNX18-202ENST00000343017 LGALS16A8MUM7 142 aa17■□□□□ 0.31
SNX18-202ENST00000343017 SNAP23O00161 211 aa17■□□□□ 0.31
SNX18-202ENST00000343017 IPO7O95373 1038 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms