RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 HELLSQ9NRZ9 838 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 ZMYND8Q9ULU4 1186 aaPredicted RBP19.22■□□□□ 0.67
SMAD4-201ENST00000342988 ORC4O43929 436 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 EHBP1L1Q8N3D4 1523 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 EFCAB8A8MWE9 144 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 PSMD7P51665 324 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 CCDC85BQ15834 202 aaPredicted RBP19.22■□□□□ 0.67
SMAD4-201ENST00000342988 TRIML2Q8N7C3 387 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 RASSF10A6NK89 507 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 APLFQ8IW19 511 aaPredicted RBP19.22■□□□□ 0.67
SMAD4-201ENST00000342988 LZTS2Q9BRK4 669 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 HIF1AQ16665 826 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 C6orf118Q5T5N4 469 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 NBNO60934 754 aa19.22■□□□□ 0.67
SMAD4-201ENST00000342988 TTC21BQ7Z4L5 1316 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 NLRP9Q7RTR0 991 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 SNX5Q9Y5X3 404 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 CD19P15391 556 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 BRF1Q92994 677 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 H0YCG3 227 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 TNNI1P19237 187 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 NR5A1Q13285 461 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 STAT1P42224 750 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 ANGPTL8Q6UXH0 198 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 SLC38A10Q9HBR0 1119 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 SLC12A1Q13621 1099 aa19.21■□□□□ 0.67
SMAD4-201ENST00000342988 ACTR5Q9H9F9 607 aaPredicted RBP19.21■□□□□ 0.67
SMAD4-201ENST00000342988 UBXN8O00124 270 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 XRCC5P13010 732 aaKnown RBP19.2■□□□□ 0.66
SMAD4-201ENST00000342988 JRKLQ9Y4A0 524 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 ZNF233A6NK53 670 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 HSPA1AP0DMV8 641 aaKnown RBP19.2■□□□□ 0.66
SMAD4-201ENST00000342988 HSPA1BP0DMV9 641 aaKnown RBP19.2■□□□□ 0.66
SMAD4-201ENST00000342988 C4BPBP20851 252 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 CALCRLQ16602 461 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 BEND3Q5T5X7 828 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.2■□□□□ 0.66
SMAD4-201ENST00000342988 MPP6Q9NZW5 540 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 HSPA6P17066 643 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 SLC12A6Q9UHW9 1150 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 MID2Q9UJV3 735 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 NAIPQ13075 1403 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 MEIS1O00470 390 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 DYNC1I2Q13409 638 aaKnown RBP19.2■□□□□ 0.66
SMAD4-201ENST00000342988 MYCT1Q8N699 235 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 CEP70Q8NHQ1 597 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 KAZNQ674X7 775 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 ASPSCR1Q9BZE9 553 aa19.2■□□□□ 0.66
SMAD4-201ENST00000342988 PDE6CP51160 858 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 CEP85Q6P2H3 762 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 ARHGEF18Q6ZSZ5 1173 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 MCM9Q9NXL9 1143 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 TRIM33Q9UPN9 1127 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 TBC1D32Q96NH3 1257 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 ZBTB18Q99592 522 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 CNOT10Q9H9A5 744 aaKnown RBP19.19■□□□□ 0.66
SMAD4-201ENST00000342988 TRPC5Q9UL62 973 aaPredicted RBP19.19■□□□□ 0.66
SMAD4-201ENST00000342988 ATP5J2-PTCD1G3V325 749 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 KRT75O95678 551 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 GNGT1P63211 74 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 ANGPT1Q15389 498 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 ANO3Q9BYT9 981 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 PDE1BQ01064 536 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 FAM69CQ0P6D2 419 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 TMEM259Q4ZIN3 620 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 MLKLQ8NB16 471 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 VPS16Q9H269 839 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 SLC52A1Q9NWF4 448 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 PAG1Q9NWQ8 432 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 TCF3P15923 654 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 GPTP24298 496 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 ELF2Q15723 593 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 CPSF3Q9UKF6 684 aaKnown RBP19.19■□□□□ 0.66
SMAD4-201ENST00000342988 TDRD9Q8NDG6 1382 aaKnown RBP19.19■□□□□ 0.66
SMAD4-201ENST00000342988 FRMD3A2A2Y4 597 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 DDIT3P35638 169 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 POLE2P56282 527 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 RAB14P61106 215 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 SLFN5Q08AF3 891 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 HDDC2Q7Z4H3 204 aa19.19■□□□□ 0.66
SMAD4-201ENST00000342988 PAIP2BQ9ULR5 123 aaKnown RBP19.19■□□□□ 0.66
SMAD4-201ENST00000342988 PMLP29590 882 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 DHX38Q92620 1227 aaKnown RBP19.18■□□□□ 0.66
SMAD4-201ENST00000342988 CCDC51Q96ER9 411 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 ABL1P00519 1130 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 BFSP1Q12934 665 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 KLHL29Q96CT2 875 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 MYO1AQ9UBC5 1043 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 RPSAP08865 295 aaKnown RBP19.18■□□□□ 0.66
SMAD4-201ENST00000342988 TEDDM1Q5T9Z0 273 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 KIF9Q9HAQ2 790 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 ST7Q9NRC1 585 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 STRIP2Q9ULQ0 834 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 SH3GL3Q99963 347 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 E2F6O75461 281 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 CDC37L1Q7L3B6 337 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 PRDM1O75626 825 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 PPP1R2P3Q6NXS1 205 aa19.18■□□□□ 0.66
SMAD4-201ENST00000342988 POLR2DO15514 142 aaKnown RBP19.17■□□□□ 0.66
SMAD4-201ENST00000342988 U2AF2P26368 475 aaKnown RBP eCLIP19.17■□□□□ 0.668e-7■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms