RNA–Protein interactions for RNA: ENST00000342287.9

PBX3-201, Transcript of PBX homeobox 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PBX3, Length 2,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-201ENST00000342287 KCNJ14Q9UNX9 436 aa16.71■□□□□ 0.27
PBX3-201ENST00000342287 PAXBP1Q9Y5B6 917 aa16.71■□□□□ 0.27
PBX3-201ENST00000342287 GOLGB1Q14789 3259 aaKnown RBP16.71■□□□□ 0.27
PBX3-201ENST00000342287 IGKV6D-41A0A0C4DH26 115 aa16.71■□□□□ 0.26
PBX3-201ENST00000342287 BMS1Q14692 1282 aaKnown RBP16.71■□□□□ 0.26
PBX3-201ENST00000342287 TNIP1Q15025 636 aa16.71■□□□□ 0.26
PBX3-201ENST00000342287 FOXP1Q9H334 677 aaPredicted RBP16.71■□□□□ 0.26
PBX3-201ENST00000342287 CXorf56Q9H5V9 222 aa16.71■□□□□ 0.26
PBX3-201ENST00000342287 BRCA1P38398 1863 aaKnown RBP16.71■□□□□ 0.26
PBX3-201ENST00000342287 LTBP3Q9NS15 1303 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 hCG_1642624A0A1W2PR95 340 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 PTGS1P23219 599 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 ZSCAN26Q16670 478 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 DIS3L2Q8IYB7 885 aaKnown RBP16.7■□□□□ 0.26
PBX3-201ENST00000342287 STAG2Q8N3U4 1231 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 PGBD1Q96JS3 809 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 PALM3A6NDB9 673 aaPredicted RBP16.7■□□□□ 0.26
PBX3-201ENST00000342287 TPM3P06753 285 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 CCDC183Q5T5S1 534 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 MTMR14Q8NCE2 650 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
PBX3-201ENST00000342287 FER1L6Q2WGJ9 1857 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 ATRNL1Q5VV63 1379 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 BTBD18B2RXH4 712 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 NOSTRINQ8IVI9 506 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 VPS54Q9P1Q0 977 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 ZNF70Q9UC06 446 aaPredicted RBP16.69■□□□□ 0.26
PBX3-201ENST00000342287 MTMR7Q9Y216 660 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 TTLL1O95922 423 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 SCG2P13521 617 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 TTC31Q49AM3 519 aaPredicted RBP16.69■□□□□ 0.26
PBX3-201ENST00000342287 METTL16Q86W50 562 aaKnown RBP16.69■□□□□ 0.26
PBX3-201ENST00000342287 LINC00301Q8NCQ3 95 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 DNAJC18Q9H819 358 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 CLIC4Q9Y696 253 aa16.69■□□□□ 0.26
PBX3-201ENST00000342287 MPHOSPH10O00566 681 aaKnown RBP16.68■□□□□ 0.26
PBX3-201ENST00000342287 YEATS4O95619 227 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 PARP1P09874 1014 aaKnown RBP16.68■□□□□ 0.26
PBX3-201ENST00000342287 PFKFB3Q16875 520 aaPredicted RBP16.68■□□□□ 0.26
PBX3-201ENST00000342287 ANO1Q5XXA6 986 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 PHF20Q9BVI0 1012 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 COL2A1P02458 1487 aaPredicted RBP16.68■□□□□ 0.26
PBX3-201ENST00000342287 AP5Z1O43299 807 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 STK38Q15208 465 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 TPD52L1Q16890 204 aaPredicted RBP16.68■□□□□ 0.26
PBX3-201ENST00000342287 CERKLQ49MI3 558 aaPredicted RBP16.68■□□□□ 0.26
PBX3-201ENST00000342287 TATDN1Q6P1N9 297 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 NLGN2Q8NFZ4 835 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 BICD2Q8TD16 824 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 CLIP2Q9UDT6 1046 aa16.68■□□□□ 0.26
PBX3-201ENST00000342287 KLRF2D3W0D1 207 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 ME1P48163 572 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 SEMA3FQ13275 785 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 SPDYE2Q495Y8 402 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 SPON1Q9HCB6 807 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 CWC15Q9P013 229 aaKnown RBP16.67■□□□□ 0.26
PBX3-201ENST00000342287 RRP15Q9Y3B9 282 aaKnown RBP16.67■□□□□ 0.26
PBX3-201ENST00000342287 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.67■□□□□ 0.26
PBX3-201ENST00000342287 MYH15Q9Y2K3 1946 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 CLRN2A0PK11 232 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 TCP10L2B9ZVM9 353 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 ATP2B1P20020 1258 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 LRMPQ12912 555 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 SF3A1Q15459 793 aaKnown RBP16.67■□□□□ 0.26
PBX3-201ENST00000342287 FKBP1CQ5VVH2 108 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 SRLQ86TD4 932 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 PACS2Q86VP3 889 aa16.67■□□□□ 0.26
PBX3-201ENST00000342287 MYO1BO43795 1136 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SMARCA1P28370 1054 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 FAM151AQ8WW52 585 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SHISA4Q96DD7 197 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 CSRNP1Q96S65 589 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SH3BP1Q9Y3L3 701 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SPTLC2O15270 562 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 GOLGA8HP0CJ92 632 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SLURP2P0DP57 97 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 LIG1P18858 919 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 RPS12P25398 132 aaKnown RBP16.66■□□□□ 0.26
PBX3-201ENST00000342287 KRT2P35908 639 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 EIF6P56537 245 aaKnown RBP16.66■□□□□ 0.26
PBX3-201ENST00000342287 NBPF20Q3BBV1 942 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 USP17L2Q6R6M4 530 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SMARCE1Q969G3 411 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SGSM3Q96HU1 749 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SPZ1Q9BXG8 430 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 FAM196BA6NMK8 535 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SLC39A14Q15043 492 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 PLCD4Q9BRC7 762 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 SH3GLB2Q9NR46 395 aa16.66■□□□□ 0.26
PBX3-201ENST00000342287 USP17L5A8MUK1 530 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 PDHBP11177 359 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 MAP2K1Q02750 393 aaPredicted RBP16.65■□□□□ 0.26
PBX3-201ENST00000342287 RASSF7Q02833 373 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 NR5A1Q13285 461 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 RILPL1Q5EBL4 403 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 ADALQ6DHV7 355 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 CCDC91Q7Z6B0 441 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 OXER1Q8TDS5 423 aa16.65■□□□□ 0.26
PBX3-201ENST00000342287 ZBED3Q96IU2 234 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms