RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 TNNT3P45378 269 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-201ENST00000342220 UBE2SQ16763 222 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 HHIPL2Q6UWX4 724 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 DGKHQ86XP1 1220 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 MICALL2Q8IY33 904 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 NEDD1Q8NHV4 660 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 RNF26Q9BY78 433 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-201ENST00000342220 FHDC1Q9C0D6 1143 aaPredicted RBP14.85□□□□□ -0.03
COL18A1-201ENST00000342220 MTMR4Q9NYA4 1195 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 MYH15Q9Y2K3 1946 aa14.85□□□□□ -0.03
COL18A1-201ENST00000342220 SMCO2A6NFE2 343 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 WNT7AO00755 349 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 CYTH3O43739 400 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 DDAH1O94760 285 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 GMPSP49915 693 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-201ENST00000342220 DGKZQ13574 1117 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 CCDC174Q6PII3 467 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 TMEM260Q9NX78 707 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 GAKO14976 1311 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 RGPD3A6NKT7 1758 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-201ENST00000342220 RGPD4Q7Z3J3 1758 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 USP17L10C9JJH3 530 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 TTLL1O95922 423 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 SHMT1P34896 483 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 PKN1Q16512 942 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 STX1AQ16623 288 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 KLHL10Q6JEL2 608 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 TYW1BQ6NUM6 668 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 CPXCR1Q8N123 301 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 KCNG4Q8TDN1 519 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 ZDHHC15Q96MV8 337 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 HOMER2Q9NSB8 354 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 TMEM232C9JQI7 657 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 COBLO75128 1261 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 SLFN13Q68D06 897 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 SH3BP5LQ7L8J4 393 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 FCHSD1Q86WN1 690 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 JMYQ8N9B5 988 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 CNNM3Q8NE01 707 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 WDR19Q8NEZ3 1342 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 GJA10Q969M2 543 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 KIFC2Q96AC6 838 aa14.84□□□□□ -0.03
COL18A1-201ENST00000342220 ZNF70Q9UC06 446 aaPredicted RBP14.84□□□□□ -0.03
COL18A1-201ENST00000342220 PDS5AQ29RF7 1337 aaKnown RBP14.83□□□□□ -0.04
COL18A1-201ENST00000342220 POLR2DO15514 142 aaKnown RBP14.83□□□□□ -0.04
COL18A1-201ENST00000342220 TNNT1P13805 278 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 PFKFB1P16118 471 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 RASA3Q14644 834 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 WWC2Q6AWC2 1192 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 ENGASEQ8NFI3 743 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 CTAGE5O15320 804 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 CAVIN2O95810 425 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 ACER1Q8TDN7 264 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 MAD2L2Q9UI95 211 aa14.83□□□□□ -0.04
COL18A1-201ENST00000342220 CNOT7Q9UIV1 285 aaKnown RBP14.83□□□□□ -0.04
COL18A1-201ENST00000342220 NFKBIEO00221 500 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 ZNF202O95125 648 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 UBXN2AP68543 259 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 FAM160A1Q05DH4 1040 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 PTPN21Q16825 1174 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 EPSTI1Q96J88 318 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 SLX4Q8IY92 1834 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 CNTNAP5Q8WYK1 1306 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 PRPF3O43395 683 aaKnown RBP14.82□□□□□ -0.04
COL18A1-201ENST00000342220 PTGDRQ13258 359 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 TPD52L1Q16890 204 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-201ENST00000342220 DNAJC18Q9H819 358 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 SPDYE2BA6NHP3 402 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 WNT10BO00744 389 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 FOXN1O15353 648 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 SPDYE6P0CI01 402 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 PNOCQ13519 176 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 TTLL12Q14166 644 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-201ENST00000342220 TTC38Q5R3I4 469 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 SARM1Q6SZW1 724 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 DHX40Q8IX18 779 aaKnown RBP14.82□□□□□ -0.04
COL18A1-201ENST00000342220 SHISA4Q96DD7 197 aa14.82□□□□□ -0.04
COL18A1-201ENST00000342220 FAM163AQ96GL9 167 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-201ENST00000342220 CTIFO43310 598 aaKnown RBP14.81□□□□□ -0.04
COL18A1-201ENST00000342220 CCNT1O60563 726 aaKnown RBP14.81□□□□□ -0.04
COL18A1-201ENST00000342220 PCP11498 1178 aaKnown RBP14.81□□□□□ -0.04
COL18A1-201ENST00000342220 CDC25BP30305 580 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 GNAQP50148 359 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 BLIDQ8IZY5 108 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 ZNF408Q9H9D4 720 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 RTEL1Q9NZ71 1219 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 CALCOCO1Q9P1Z2 691 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 SSBP05455 408 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL18A1-201ENST00000342220 GPR162Q16538 588 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 LRRC8AQ8IWT6 810 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 SPON1Q9HCB6 807 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L15C9J2P7 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L13C9JLJ4 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L11C9JVI0 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L18D6R9N7 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L22D6RA61 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L17D6RBQ6 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L19D6RCP7 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 USP17L20D6RJB6 530 aa14.81□□□□□ -0.04
COL18A1-201ENST00000342220 PDHBP11177 359 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms