RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 GYPCP04921 128 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 TPM1P09493 284 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 FECHP22830 423 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 GNAQP50148 359 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 SPAG1Q07617 926 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 CCDC51Q96ER9 411 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 MRPL44Q9H9J2 332 aaKnown RBP16.46■□□□□ 0.23
TDP2-201ENST00000341060 TCP11L1Q9NUJ3 509 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 ARGLU1Q9NWB6 273 aaPredicted RBP16.46■□□□□ 0.23
TDP2-201ENST00000341060 ADGRG1Q9Y653 693 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 FOCADQ5VW36 1801 aa16.46■□□□□ 0.23
TDP2-201ENST00000341060 CASP14P31944 242 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 KRT31Q15323 416 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 TYW1BQ6NUM6 668 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 RAD9BQ6WBX8 426 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 DAGLBQ8NCG7 672 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 SH3RF3Q8TEJ3 882 aaPredicted RBP16.45■□□□□ 0.22
TDP2-201ENST00000341060 DISC1Q9NRI5 854 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 RTCBQ9Y3I0 505 aaKnown RBP16.45■□□□□ 0.22
TDP2-201ENST00000341060 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
TDP2-201ENST00000341060 BMS1Q14692 1282 aaKnown RBP16.45■□□□□ 0.22
TDP2-201ENST00000341060 GALNT17Q6IS24 598 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 AMOTL1Q8IY63 956 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 CPLX3Q8WVH0 158 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 DYNLL2Q96FJ2 89 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 MKNK2Q9HBH9 465 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 ANKIB1Q9P2G1 1089 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 LEMD3Q9Y2U8 911 aa16.45■□□□□ 0.22
TDP2-201ENST00000341060 CCDC194A0A1B0GVG4 234 aa16.44■□□□□ 0.22
TDP2-201ENST00000341060 BAG3O95817 575 aa16.44■□□□□ 0.22
TDP2-201ENST00000341060 TSPY3P0CV98 308 aa16.44■□□□□ 0.22
TDP2-201ENST00000341060 TSPY8P0CW00 308 aa16.44■□□□□ 0.22
TDP2-201ENST00000341060 STAT6P42226 847 aa16.44■□□□□ 0.22
TDP2-201ENST00000341060 GSTO1P78417 241 aa16.44■□□□□ 0.22
TDP2-201ENST00000341060 RASGRP2Q7LDG7 609 aa16.44■□□□□ 0.22
TDP2-201ENST00000341060 CCT6AP40227 531 aaKnown RBP16.43■□□□□ 0.22
TDP2-201ENST00000341060 FXR1P51114 621 aaKnown RBP eCLIP16.43■□□□□ 0.22
TDP2-201ENST00000341060 PPP4CP60510 307 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 KARSQ15046 597 aaKnown RBP16.43■□□□□ 0.22
TDP2-201ENST00000341060 TCP11X2Q5H9J9 407 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 WWC2Q6AWC2 1192 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 AMIGO3Q86WK7 504 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 RASGRP4Q8TDF6 673 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 NELFBQ8WX92 580 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 ARHGEF1Q92888 912 aaKnown RBP16.43■□□□□ 0.22
TDP2-201ENST00000341060 PKNOX2Q96KN3 472 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 PCDHA6Q9UN73 950 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 PCDHA8Q9Y5H6 950 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 FHOD1Q9Y613 1164 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 USP17L3A6NCW0 530 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 USP17L4A6NCW7 530 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 N4BP3O15049 544 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 CYTH3O43739 400 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 ZRANB2O95218 330 aaKnown RBP eCLIP16.43■□□□□ 0.22
TDP2-201ENST00000341060 CDC25AP30304 524 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 PPP2R3AQ06190 1150 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 GRAPQ13588 217 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 SLC35G1Q2M3R5 365 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 DTHD1Q6ZMT9 781 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 USP17L1Q7RTZ2 530 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 ANKRD20A12PQ8NF67 263 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 GRAPLQ8TC17 118 aaPredicted RBP16.43■□□□□ 0.22
TDP2-201ENST00000341060 CCDC12Q8WUD4 166 aaPredicted RBP16.43■□□□□ 0.22
TDP2-201ENST00000341060 LRRC4BQ9NT99 713 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 BARHL2Q9NY43 387 aa16.43■□□□□ 0.22
TDP2-201ENST00000341060 KCNJ18B7U540 433 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 LAD1O00515 517 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 MYL1P05976 194 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 PRCPP42785 496 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 COPB1P53618 953 aaKnown RBP16.42■□□□□ 0.22
TDP2-201ENST00000341060 TRIM14Q14142 442 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 KCNJ12Q14500 433 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 DIXDC1Q155Q3 683 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 NAALADL2Q58DX5 795 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
TDP2-201ENST00000341060 STXBP3O00186 592 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 COBLO75128 1261 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 KIF20AO95235 890 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 NFIXQ14938 502 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 RSRC2Q7L4I2 434 aaKnown RBP16.42■□□□□ 0.22
TDP2-201ENST00000341060 ZNF804AQ7Z570 1209 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 ZNF444Q8N0Y2 327 aaPredicted RBP16.42■□□□□ 0.22
TDP2-201ENST00000341060 GPR161Q8N6U8 529 aaKnown RBP16.42■□□□□ 0.22
TDP2-201ENST00000341060 TGFBRAP1Q8WUH2 860 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 IRX2Q9BZI1 471 aaPredicted RBP16.42■□□□□ 0.22
TDP2-201ENST00000341060 LZTFL1Q9NQ48 299 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 ABHD10Q9NUJ1 306 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 GDAQ9Y2T3 454 aa16.42■□□□□ 0.22
TDP2-201ENST00000341060 SNED1Q8TER0 1413 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 PNMA6AP0CW24 399 aaPredicted RBP16.41■□□□□ 0.22
TDP2-201ENST00000341060 RASA1P20936 1047 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 PRPHP41219 470 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 SEMA3FQ13275 785 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 KCNB1Q14721 858 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 TMCO3Q6UWJ1 677 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 C15orf52Q6ZUT6 534 aaKnown RBP16.41■□□□□ 0.22
TDP2-201ENST00000341060 HEATR3Q7Z4Q2 680 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 CERS3Q8IU89 383 aa16.41■□□□□ 0.22
TDP2-201ENST00000341060 TMEM47Q9BQJ4 181 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms