RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 GPHNQ9NQX3 736 aaPredicted RBP17.22■□□□□ 0.35
LIMK2-203ENST00000340552 TARSL2A2RTX5 802 aaKnown RBP17.22■□□□□ 0.35
LIMK2-203ENST00000340552 RTN2O75298 545 aa17.22■□□□□ 0.35
LIMK2-203ENST00000340552 ERCC3P19447 782 aa17.22■□□□□ 0.35
LIMK2-203ENST00000340552 CASP14P31944 242 aa17.22■□□□□ 0.35
LIMK2-203ENST00000340552 RASGRF1Q13972 1273 aa17.22■□□□□ 0.35
LIMK2-203ENST00000340552 CCNI2Q6ZMN8 369 aaPredicted RBP17.22■□□□□ 0.35
LIMK2-203ENST00000340552 APTXQ7Z2E3 356 aaKnown RBP17.22■□□□□ 0.35
LIMK2-203ENST00000340552 NLRP3Q96P20 1036 aa17.22■□□□□ 0.35
LIMK2-203ENST00000340552 TRIM6Q9C030 488 aaPredicted RBP17.22■□□□□ 0.35
LIMK2-203ENST00000340552 C4AP0C0L4 1744 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 FAM237AA0A1B0GTK4 181 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 ENC1O14682 589 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 CALRP27797 417 aaKnown RBP17.21■□□□□ 0.35
LIMK2-203ENST00000340552 BCAMP50895 628 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 SMTNP53814 917 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 ERVK-24P63145 666 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 CEP85LQ5SZL2 805 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 RESP18Q5W5W9 173 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 CCDC24Q8N4L8 307 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 CENPHQ9H3R5 247 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 VCPKMTQ9H867 229 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 BSDC1Q9NW68 430 aaPredicted RBP17.21■□□□□ 0.35
LIMK2-203ENST00000340552 MYO1AQ9UBC5 1043 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 DDX20Q9UHI6 824 aaKnown RBP17.21■□□□□ 0.35
LIMK2-203ENST00000340552 FRMD3A2A2Y4 597 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 TMCO5BA8MYB1 307 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 GPAA1O43292 621 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 SRGAP2O75044 1071 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.35
LIMK2-203ENST00000340552 TBC1D8BQ0IIM8 1120 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 CCDC40Q4G0X9 1142 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 FMNL3Q8IVF7 1028 aa17.21■□□□□ 0.35
LIMK2-203ENST00000340552 FOXP2O15409 715 aa17.2■□□□□ 0.34
LIMK2-203ENST00000340552 PBX1P40424 430 aa17.2■□□□□ 0.34
LIMK2-203ENST00000340552 FXR1P51114 621 aaKnown RBP eCLIP17.2■□□□□ 0.34
LIMK2-203ENST00000340552 KRT27Q7Z3Y8 459 aa17.2■□□□□ 0.34
LIMK2-203ENST00000340552 CELF1Q92879 486 aaKnown RBP17.2■□□□□ 0.34
LIMK2-203ENST00000340552 RBM28Q9NW13 759 aaKnown RBP17.2■□□□□ 0.34
LIMK2-203ENST00000340552 TRIM10Q9UDY6 481 aa17.2■□□□□ 0.34
LIMK2-203ENST00000340552 BRWD3Q6RI45 1802 aa17.2■□□□□ 0.34
LIMK2-203ENST00000340552 IRX1P78414 480 aaPredicted RBP17.2■□□□□ 0.34
LIMK2-203ENST00000340552 SKOR1P84550 965 aa17.2■□□□□ 0.34
LIMK2-203ENST00000340552 UBE3CQ15386 1083 aa17.2■□□□□ 0.34
LIMK2-203ENST00000340552 TMED8Q6PL24 325 aaPredicted RBP17.2■□□□□ 0.34
LIMK2-203ENST00000340552 RRP36Q96EU6 259 aaKnown RBP17.2■□□□□ 0.34
LIMK2-203ENST00000340552 HINFPQ9BQA5 517 aa17.2■□□□□ 0.34
LIMK2-203ENST00000340552 GOLGA8KD6RF30 607 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 E7EWF7 191 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 CCNHP51946 323 aaPredicted RBP17.19■□□□□ 0.34
LIMK2-203ENST00000340552 SARNPP82979 210 aaKnown RBP17.19■□□□□ 0.34
LIMK2-203ENST00000340552 PTPAQ15257 358 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 CCDC13Q8IYE1 715 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 KIRREL3Q8IZU9 778 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 SLC40A1Q9NP59 571 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 WWC3Q9ULE0 1092 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 ZNF532Q9HCE3 1301 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 GYPCP04921 128 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 PDHBP11177 359 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 PDE6AP16499 860 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 TTMPQ5BVD1 217 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 FAM43BQ6ZT52 329 aaPredicted RBP17.19■□□□□ 0.34
LIMK2-203ENST00000340552 CEP57Q86XR8 500 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 SPATS2Q86XZ4 545 aaKnown RBP17.19■□□□□ 0.34
LIMK2-203ENST00000340552 AENQ8WTP8 325 aaKnown RBP17.19■□□□□ 0.34
LIMK2-203ENST00000340552 ARL8AQ96BM9 186 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 CAPZA3Q96KX2 299 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 KCNH3Q9ULD8 1083 aa17.19■□□□□ 0.34
LIMK2-203ENST00000340552 PPP6R2O75170 966 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 FGAP02671 866 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 FECHP22830 423 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 CLNS1AP54105 237 aaKnown RBP17.18■□□□□ 0.34
LIMK2-203ENST00000340552 NAP1L1P55209 391 aaKnown RBP17.18■□□□□ 0.34
LIMK2-203ENST00000340552 YTHDF3Q7Z739 585 aaKnown RBP17.18■□□□□ 0.34
LIMK2-203ENST00000340552 FAM228AQ86W67 206 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 A0A1B0GUL6 1792 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 TRIM37O94972 964 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 ATP1A1P05023 1023 aaKnown RBP17.18■□□□□ 0.34
LIMK2-203ENST00000340552 RNF187Q5TA31 235 aaPredicted RBP17.18■□□□□ 0.34
LIMK2-203ENST00000340552 RAB11FIP4Q86YS3 637 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 MLKLQ8NB16 471 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 SLF1Q9BQI6 1058 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 POLD4Q9HCU8 107 aa17.18■□□□□ 0.34
LIMK2-203ENST00000340552 KLHL33A6NCF5 533 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 IMMTQ16891 758 aaKnown RBP17.17■□□□□ 0.34
LIMK2-203ENST00000340552 NAA35Q5VZE5 725 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 SND1Q7KZF4 910 aaKnown RBP eCLIP17.17■□□□□ 0.34
LIMK2-203ENST00000340552 GUCA1BQ9UMX6 200 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.17■□□□□ 0.34
LIMK2-203ENST00000340552 RPS8P62241 208 aaKnown RBP17.17■□□□□ 0.34
LIMK2-203ENST00000340552 MAP3K12Q12852 859 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 UBE4AQ14139 1066 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 SPECC1Q5M775 1068 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 PAGR1Q9BTK6 254 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 FAM184BQ9ULE4 1060 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.17■□□□□ 0.34
LIMK2-203ENST00000340552 DOCK2Q92608 1830 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 TCRBV5S4A2TA0A5A2 114 aa17.17■□□□□ 0.34
LIMK2-203ENST00000340552 WTIPA6NIX2 430 aaPredicted RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms