RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 EXOC4Q96A65 974 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 ACSBG1Q96GR2 724 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 AK7Q96M32 723 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 NACAP1Q9BZK3 213 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 RAB21Q9UL25 225 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 CEP131Q9UPN4 1083 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 COL4A1P02462 1669 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 CDHR2Q9BYE9 1310 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 LOC102724428A0A0B4J2F2 783 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 ERVV-1B6SEH8 477 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 ONECUT3O60422 494 aaPredicted RBP13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 ACTN2P35609 894 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 SIK1P57059 783 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 MUM1L1Q5H9M0 696 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 IFIT1BQ5T764 474 aaKnown RBP13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 KANK3Q6NY19 840 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 CNGA4Q8IV77 575 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 RRP15Q9Y3B9 282 aaKnown RBP13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 NUP98P52948 1817 aa13.48□□□□□ -0.25
CCDC144CP-201ENST00000340196 AMPD2Q01433 879 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 E2F4Q16254 413 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 SMIM5Q71RC9 77 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 IRF2BP1Q8IU81 584 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 SRBD1Q8N5C6 995 aaKnown RBP13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 SMCR8Q8TEV9 937 aaPredicted RBP13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 FAM204AQ9H8W3 233 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 POLD4Q9HCU8 107 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 MYO6Q9UM54 1294 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 COL5A3P25940 1745 aaPredicted RBP13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 SRCAPQ6ZRS2 3230 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 EIF5P55010 431 aaKnown RBP13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 CYP27A1Q02318 531 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 TCP11X2Q5H9J9 407 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 INTS5Q6P9B9 1019 aaKnown RBP13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 SAMD1Q6SPF0 538 aaPredicted RBP13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 ZSCAN10Q96SZ4 725 aaPredicted RBP13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 PSMB7Q99436 277 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 AGPAT5Q9NUQ2 364 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 SMARCAL1Q9NZC9 954 aa13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 MYH14Q7Z406 1995 aaKnown RBP13.47□□□□□ -0.25
CCDC144CP-201ENST00000340196 FAM205AQ6ZU69 1335 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 CYP2D6P10635 497 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 PAK1Q13153 545 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 PDXDC2PQ6P474 469 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 SRLQ86TD4 932 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 SLC51AQ86UW1 340 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 ELOA2Q8IYF1 753 aaPredicted RBP13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 GOLGA5Q8TBA6 731 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 LRRC15Q8TF66 581 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 ZNF384Q8TF68 577 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 DRC1Q96MC2 740 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 GSDMAQ96QA5 445 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 RNF26Q9BY78 433 aaPredicted RBP13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 LACRTQ9GZZ8 138 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 CHD4Q14839 1912 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 CCDC196A0A1B0GTZ2 297 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 KCNQ2O43526 872 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 NDUFA10O95299 355 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 USP5P45974 858 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 HERVK_113P62684 666 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 TROAPQ12815 778 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 TNFRSF25Q93038 417 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 GJD4Q96KN9 370 aaPredicted RBP13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 EHD4Q9H223 541 aa13.46□□□□□ -0.25
CCDC144CP-201ENST00000340196 MYH2Q9UKX2 1941 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 ATP6V1AP38606 617 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 GTF2A1P52655 376 aaPredicted RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 HPS3Q969F9 1004 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 NAA15Q9BXJ9 866 aaKnown RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 TTF2Q9UNY4 1162 aaKnown RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 EPN1Q9Y6I3 576 aaPredicted RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 MACROD2A1Z1Q3 448 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 PDE2AO00408 941 aaPredicted RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 PPARDQ03181 441 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 WDR59Q6PJI9 974 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 CYP26C1Q6V0L0 522 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 EP400NLQ6ZTU2 488 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 ESR2Q92731 530 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 RASSF4Q9H2L5 321 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 CCDC87Q9NVE4 849 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 GNL3LQ9NVN8 582 aaKnown RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 EHD2Q9NZN4 543 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 B4DLN1 442 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 RNF40O75150 1001 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 KLRK1P26718 216 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 CHRNDQ07001 517 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 ITPK1Q13572 414 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 LEKR1Q6ZMV7 388 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 KRT26Q7Z3Y9 468 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 TMTC1Q8IUR5 882 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 HNRNPLLQ8WVV9 542 aaKnown RBP13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 CTAGE1Q96RT6 745 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 CPVLQ9H3G5 476 aa13.45□□□□□ -0.26
CCDC144CP-201ENST00000340196 NHSQ6T4R5 1651 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 MROH5Q6ZUA9 1318 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 MAGEB6P1A0A0J9YX57 407 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 USP17L12C9JPN9 530 aa13.44□□□□□ -0.26
CCDC144CP-201ENST00000340196 USP17L21D6R901 530 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms