RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 NOVA2Q9UNW9 492 aaKnown RBP13.85□□□□□ -0.19
BRPF3-201ENST00000339717 C2CD2Q9Y426 696 aa13.85□□□□□ -0.19
BRPF3-201ENST00000339717 ZMYND10O75800 440 aa13.85□□□□□ -0.19
BRPF3-201ENST00000339717 SERPINB6P35237 376 aa13.85□□□□□ -0.19
BRPF3-201ENST00000339717 ITGB3BPQ13352 177 aaPredicted RBP13.85□□□□□ -0.19
BRPF3-201ENST00000339717 C1orf141Q5JVX7 400 aa13.85□□□□□ -0.19
BRPF3-201ENST00000339717 PPP1R42Q7Z4L9 355 aa13.85□□□□□ -0.19
BRPF3-201ENST00000339717 ABHD8Q96I13 439 aa13.85□□□□□ -0.19
BRPF3-201ENST00000339717 HPCAL4Q9UM19 191 aa13.85□□□□□ -0.19
BRPF3-201ENST00000339717 FESP07332 822 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 PDHBP11177 359 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 KRT2P35908 639 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 AGGF1Q8N302 714 aaeCLIP13.84□□□□□ -0.19
BRPF3-201ENST00000339717 PANX2Q96RD6 677 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 RAP1GDS1P52306 607 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 MTTPP55157 894 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 ARID5BQ14865 1188 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 ARHGEF25Q86VW2 580 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 RUNDC3BQ96NL0 473 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 GID8Q9NWU2 228 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 FBXO9Q9UK97 447 aaPredicted RBP13.84□□□□□ -0.19
BRPF3-201ENST00000339717 EPN1Q9Y6I3 576 aaPredicted RBP13.84□□□□□ -0.19
BRPF3-201ENST00000339717 NAIPQ13075 1403 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 LONP1P36776 959 aaKnown RBP13.84□□□□□ -0.19
BRPF3-201ENST00000339717 MAGEA1P43355 309 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 MRPS15P82914 257 aaKnown RBP13.84□□□□□ -0.19
BRPF3-201ENST00000339717 BEND6Q5SZJ8 279 aaPredicted RBP13.84□□□□□ -0.19
BRPF3-201ENST00000339717 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.84□□□□□ -0.19
BRPF3-201ENST00000339717 B4DLN1 442 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 DNAJC6O75061 913 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 KRT8P05787 483 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 PPARDQ03181 441 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 TNIP1Q15025 636 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 ARHGEF18Q6ZSZ5 1173 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 ZNF554Q86TJ5 538 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 CYFIP2Q96F07 1278 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 MKL2Q9ULH7 1088 aa13.84□□□□□ -0.19
BRPF3-201ENST00000339717 SYCE1LA8MT33 242 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 HEXIM1O94992 359 aaKnown RBP13.83□□□□□ -0.19
BRPF3-201ENST00000339717 ECEL1O95672 775 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 KRT7P08729 469 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 MX2P20592 715 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 IFNAR2P48551 515 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 CBX3Q13185 183 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 ADALQ6DHV7 355 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 NRBF2Q96F24 287 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 SEC16BQ96JE7 1060 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 DBNLQ9UJU6 430 aaKnown RBP13.83□□□□□ -0.19
BRPF3-201ENST00000339717 LZTS1Q9Y250 596 aa13.83□□□□□ -0.19
BRPF3-201ENST00000339717 SYNRGQ9UMZ2 1314 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 ADARP55265 1226 aaKnown RBP13.83□□□□□ -0.2
BRPF3-201ENST00000339717 RPS6KA1Q15418 735 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 THOC7Q6I9Y2 204 aaKnown RBP13.83□□□□□ -0.2
BRPF3-201ENST00000339717 NACA2Q9H009 215 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 SBNO1A3KN83 1393 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 CCT8L1PA6NM43 557 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 I3L4J1 428 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 GHRP10912 638 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 MARCKSP29966 332 aaPredicted RBP13.83□□□□□ -0.2
BRPF3-201ENST00000339717 MYBPC2Q14324 1141 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 C11orf57Q6ZUT1 292 aaPredicted RBP13.83□□□□□ -0.2
BRPF3-201ENST00000339717 SIX5Q8N196 739 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 DDHD1Q8NEL9 900 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 KIFAP3Q92845 792 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 TSPAN18Q96SJ8 248 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 RIOK1Q9BRS2 568 aaKnown RBP13.83□□□□□ -0.2
BRPF3-201ENST00000339717 ETNK1Q9HBU6 452 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 RBM8AQ9Y5S9 174 aaKnown RBP13.83□□□□□ -0.2
BRPF3-201ENST00000339717 MMEP08473 750 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 VHLP40337 213 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 STX17P56962 302 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 FLIIQ13045 1269 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 CCDC153Q494R4 210 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 TMEM110Q86TL2 294 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 NEUROD6Q96NK8 337 aa13.83□□□□□ -0.2
BRPF3-201ENST00000339717 H3BQF6 201 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 CYP2E1P05181 493 aaPredicted RBP13.82□□□□□ -0.2
BRPF3-201ENST00000339717 USP5P45974 858 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 CCZ1BP86790 482 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 CCZ1P86791 482 aaPredicted RBP13.82□□□□□ -0.2
BRPF3-201ENST00000339717 TRIM63Q969Q1 353 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 RBM41Q96IZ5 413 aaKnown RBP13.82□□□□□ -0.2
BRPF3-201ENST00000339717 CHAMP1Q96JM3 812 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 EPB41L5Q9HCM4 733 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 GALNT8Q9NY28 637 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 FCHSD2O94868 740 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 PTGISQ16647 500 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 CDC37L1Q7L3B6 337 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 CROCCP3Q8IVE0 287 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 CALML6Q8TD86 181 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 EPS15L1Q9UBC2 864 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 ATXN2Q99700 1313 aaKnown RBP13.82□□□□□ -0.2
BRPF3-201ENST00000339717 STRNO43815 780 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 FMNL1O95466 1100 aaPredicted RBP13.82□□□□□ -0.2
BRPF3-201ENST00000339717 PPP1R2P41236 205 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 SERPINB8P50452 374 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 AP2B1P63010 937 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 LONRF3Q496Y0 759 aa13.82□□□□□ -0.2
BRPF3-201ENST00000339717 ANKRD23Q86SG2 305 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms