RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 PCK1P35558 622 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 PAFAH1B1P43034 410 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 RCSD1Q6JBY9 416 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 JAKMIP2Q96AA8 810 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 STAMBPL1Q96FJ0 436 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 MMS19Q96T76 1030 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 CHCHD3Q9NX63 227 aaKnown RBP10.35□□□□□ -0.75
RPGR-202ENST00000339363 HPSEQ9Y251 543 aa10.35□□□□□ -0.75
RPGR-202ENST00000339363 A0A1W2PQ27 194 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 A0A1W2PQ64 194 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 A0A1W2PQD8 194 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 NR1D1P20393 614 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 GUCY2FP51841 1108 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 POLE2P56282 527 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 TRIM29Q14134 588 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 DBN1Q16643 649 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 KCTD19Q17RG1 926 aaPredicted RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 ACCSLQ4AC99 568 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 TBC1D1Q86TI0 1168 aaPredicted RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 CCDC170Q8IYT3 715 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 FUKQ8N0W3 1084 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 MSL3Q8N5Y2 521 aaKnown RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 ARFGAP2Q8N6H7 521 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 CCDC63Q8NA47 563 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 TRIM58Q8NG06 486 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 ZKSCAN3Q9BRR0 538 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 ZNF330Q9Y3S2 320 aaPredicted RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 OPLAHO14841 1288 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 KRT14P02533 472 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 MDM2Q00987 491 aaPredicted RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 EVX2Q03828 476 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 NR5A1Q13285 461 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 AMOTQ4VCS5 1084 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 EARS2Q5JPH6 523 aaKnown RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 WDR93Q6P2C0 686 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 B4GALNT2Q8NHY0 566 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 CCDC43Q96MW1 224 aaKnown RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 GLI3P10071 1580 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 WTIPA6NIX2 430 aaPredicted RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 B4E1Z4 1266 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 DIAPH2O60879 1101 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 PYGLP06737 847 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 PRPHP41219 470 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 SLC8A3P57103 927 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 APBA1Q02410 837 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 DPYDQ12882 1025 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 RASSF8Q8NHQ8 419 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 OXER1Q8TDS5 423 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 STAMQ92783 540 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 HOOK2Q96ED9 719 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 FAM89AQ96GI7 184 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 NAA15Q9BXJ9 866 aaKnown RBP10.34□□□□□ -0.75
RPGR-202ENST00000339363 EPN3Q9H201 632 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 TUBE1Q9UJT0 475 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 TRPC6Q9Y210 931 aa10.34□□□□□ -0.75
RPGR-202ENST00000339363 PPP1R37O75864 691 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 CD44P16070 742 aaKnown RBP10.33□□□□□ -0.76
RPGR-202ENST00000339363 KRT9P35527 623 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 GRIK3Q13003 919 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 KRT40Q6A162 431 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 TMTC1Q8IUR5 882 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 RRP36Q96EU6 259 aaKnown RBP10.33□□□□□ -0.76
RPGR-202ENST00000339363 ZCWPW1Q9H0M4 648 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 C19orf44Q9H6X5 657 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 ARFGEF2Q9Y6D5 1785 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 LRRD1A4D1F6 860 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 BTBD18B2RXH4 712 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 H7C1W4 665 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 CMA1P23946 247 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 MCAMP43121 646 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 FNTAP49354 379 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 SLC39A14Q15043 492 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 KLHL23Q8NBE8 558 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 XAGE2Q96GT9 111 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 RNPC3Q96LT9 517 aaKnown RBP10.33□□□□□ -0.76
RPGR-202ENST00000339363 OSBPL9Q96SU4 736 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 PSMD1Q99460 953 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 PPP1R12CQ9BZL4 782 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 NOD2Q9HC29 1040 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 ZNHIT6Q9NWK9 470 aaKnown RBP10.33□□□□□ -0.76
RPGR-202ENST00000339363 WWC3Q9ULE0 1092 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 STK38LQ9Y2H1 464 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 L3MBTL1Q9Y468 752 aa10.33□□□□□ -0.76
RPGR-202ENST00000339363 HGSO14964 777 aaPredicted RBP10.32□□□□□ -0.76
RPGR-202ENST00000339363 USP4Q13107 963 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 NTRK3Q16288 839 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 SLC9C2Q5TAH2 1124 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 HHATQ5VTY9 493 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 CCNI2Q6ZMN8 369 aaPredicted RBP10.32□□□□□ -0.76
RPGR-202ENST00000339363 TAX1BP1Q86VP1 789 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 VPS16Q9H269 839 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 HELLSQ9NRZ9 838 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 GPAA1O43292 621 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 UPP2O95045 317 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 GNAT1P11488 350 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 TBX2Q13207 712 aaPredicted RBP10.32□□□□□ -0.76
RPGR-202ENST00000339363 CERKQ8TCT0 537 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
RPGR-202ENST00000339363 ALG1Q9BT22 464 aa10.32□□□□□ -0.76
RPGR-202ENST00000339363 PAPOLBQ9NRJ5 636 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms