RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 ZNF444Q8N0Y2 327 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PPP1R13BQ96KQ4 1090 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 EYA3Q99504 573 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 TMEM60Q9H2L4 133 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 BARHL2Q9NY43 387 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 GNAQP50148 359 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 GABPAQ06546 454 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CEP135Q66GS9 1140 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CERS3Q8IU89 383 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 SMYD4Q8IYR2 804 aaPredicted RBP14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 NLGN2Q8NFZ4 835 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 LRRC15Q8TF66 581 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 ANKRD7Q92527 254 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 SPZ1Q9BXG8 430 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PDCL3Q9H2J4 239 aa14.76□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PLIN4Q96Q06 1357 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 C10orf71Q711Q0 1435 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 UTRNP46939 3433 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PPEF1O14829 653 aaPredicted RBP14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CDKAL1Q5VV42 579 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 SP8Q8IXZ3 490 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 STAMQ92783 540 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CEP95Q96GE4 821 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 STX8Q9UNK0 236 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CD2APQ9Y5K6 639 aa14.75□□□□□ -0.05
CDK5RAP1-201ENST00000339269 NAALADL2Q58DX5 795 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 ARL6IP4Q66PJ3 421 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 GSDMAQ96QA5 445 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 DDX4Q9NQI0 724 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 ATP6V0A2Q9Y487 856 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 COL11A2P13942 1736 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 MYH1P12882 1939 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 ADAMTSL1Q8N6G6 1762 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 IGKV6D-41A0A0C4DH26 115 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 A0A1B0GTH6 734 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 KLRF2D3W0D1 207 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 FANCGO15287 622 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PLCG2P16885 1265 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CDC25AP30304 524 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PBX1P40424 430 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 GTF2IP78347 998 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 NCBP1Q09161 790 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 NR1I3Q14994 352 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PTPN14Q15678 1187 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 GLIPR1L2Q4G1C9 344 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CT47A1Q5JQC4 288 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 USP17L2Q6R6M4 530 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 HEATR3Q7Z4Q2 680 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 AMOTL1Q8IY63 956 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 TBC1D22AQ8WUA7 517 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 MXD3Q9BW11 206 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 MTMR7Q9Y216 660 aa14.74□□□□□ -0.05
CDK5RAP1-201ENST00000339269 BRCA1P38398 1863 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 C6orf229H3BNL8 230 aa14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 SRGNP10124 158 aa14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 LONP1P36776 959 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 INF2Q27J81 1249 aa14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 SPATA1Q5VX52 437 aa14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 TC2NQ8N9U0 490 aa14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 ZMYND12Q9H0C1 365 aa14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 BLZF1Q9H2G9 400 aa14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PAXBP1Q9Y5B6 917 aa14.73□□□□□ -0.05
CDK5RAP1-201ENST00000339269 PP2D1A8MPX8 630 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 GTPBP6O43824 516 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 NAA30Q147X3 362 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 KARSQ15046 597 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 GALNT17Q6IS24 598 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 IQUBQ8NA54 791 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 LZTS2Q9BRK4 669 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 SYNRGQ9UMZ2 1314 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 USP17L5A8MUK1 530 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 RIMBP2O15034 1052 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 TEX33O43247 280 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 EDIL3O43854 480 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 TOP1P11387 765 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 STX17P56962 302 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 DHX8Q14562 1220 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 TMC4Q7Z404 712 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 REXO1L1PQ8IX06 675 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 FAM177A1Q8N128 213 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 COA1Q9GZY4 146 aa14.72□□□□□ -0.05
CDK5RAP1-201ENST00000339269 KLHL10Q6JEL2 608 aa14.71□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CLEC10AQ8IUN9 316 aa14.71□□□□□ -0.05
CDK5RAP1-201ENST00000339269 CCDC148Q8NFR7 591 aa14.71□□□□□ -0.05
CDK5RAP1-201ENST00000339269 MAP7D2Q96T17 732 aa14.71□□□□□ -0.05
CDK5RAP1-201ENST00000339269 ADD3Q9UEY8 706 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP1-201ENST00000339269 COBLO75128 1261 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 PARP1P09874 1014 aaKnown RBP14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 SNHG28P0DPA3 235 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 PDHBP11177 359 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 AKR1B1P15121 316 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 SPECC1LQ69YQ0 1117 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 TRIM65Q6PJ69 517 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 CCDC112Q8NEF3 446 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 RIOX1Q9H6W3 641 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 ZNF287Q9HBT7 754 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 DISC1Q9NRI5 854 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 MTMR4Q9NYA4 1195 aa14.7□□□□□ -0.06
CDK5RAP1-201ENST00000339269 CCDC194A0A1B0GVG4 234 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms