RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 APBA2Q99767 749 aa18.02■□□□□ 0.48
PRKN-201ENST00000338468 TMEM47Q9BQJ4 181 aa18.02■□□□□ 0.48
PRKN-201ENST00000338468 FLRT1Q9NZU1 646 aa18.02■□□□□ 0.48
PRKN-201ENST00000338468 CTNNA3Q9UI47 895 aa18.02■□□□□ 0.48
PRKN-201ENST00000338468 FEM1BQ9UK73 627 aa18.02■□□□□ 0.48
PRKN-201ENST00000338468 IGHA2P01877 340 aa18.01■□□□□ 0.47
PRKN-201ENST00000338468 HOXC6P09630 235 aa18.01■□□□□ 0.47
PRKN-201ENST00000338468 MCCP23508 829 aa18.01■□□□□ 0.47
PRKN-201ENST00000338468 IMMTQ16891 758 aaKnown RBP18.01■□□□□ 0.47
PRKN-201ENST00000338468 MAP3K21Q5TCX8 1036 aa18.01■□□□□ 0.47
PRKN-201ENST00000338468 NCAPG2Q86XI2 1143 aa18.01■□□□□ 0.47
PRKN-201ENST00000338468 NPLOC4Q8TAT6 608 aa18.01■□□□□ 0.47
PRKN-201ENST00000338468 CCDC136Q96JN2 1154 aa18.01■□□□□ 0.47
PRKN-201ENST00000338468 MROH8Q9H579 483 aa18.01■□□□□ 0.47
PRKN-201ENST00000338468 CWC22Q9HCG8 908 aaKnown RBP18.01■□□□□ 0.47
PRKN-201ENST00000338468 PAK6Q9NQU5 681 aaPredicted RBP18.01■□□□□ 0.47
PRKN-201ENST00000338468 TMEM232C9JQI7 657 aa18■□□□□ 0.47
PRKN-201ENST00000338468 COBLO75128 1261 aa18■□□□□ 0.47
PRKN-201ENST00000338468 SLC25A27O95847 323 aa18■□□□□ 0.47
PRKN-201ENST00000338468 TFRCP02786 760 aaKnown RBP18■□□□□ 0.47
PRKN-201ENST00000338468 TOP1P11387 765 aaKnown RBP18■□□□□ 0.47
PRKN-201ENST00000338468 ADORA2AP29274 412 aa18■□□□□ 0.47
PRKN-201ENST00000338468 STAT3P40763 770 aa18■□□□□ 0.47
PRKN-201ENST00000338468 BMP2KLQ5H9B9 411 aa18■□□□□ 0.47
PRKN-201ENST00000338468 ESR2Q92731 530 aa18■□□□□ 0.47
PRKN-201ENST00000338468 KIFC2Q96AC6 838 aa18■□□□□ 0.47
PRKN-201ENST00000338468 DEFB118Q96PH6 123 aa18■□□□□ 0.47
PRKN-201ENST00000338468 SLC38A10Q9HBR0 1119 aa18■□□□□ 0.47
PRKN-201ENST00000338468 TAF6LQ9Y6J9 622 aa18■□□□□ 0.47
PRKN-201ENST00000338468 IVNS1ABPQ9Y6Y0 642 aa18■□□□□ 0.47
PRKN-201ENST00000338468 COL6A3P12111 3177 aa18■□□□□ 0.47
PRKN-201ENST00000338468 B4E1Z4 1266 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 ATP2A1O14983 1001 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 STRNO43815 780 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 PLA2G6O60733 806 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 KDM4AO75164 1064 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 ZKSCAN1P17029 563 aaPredicted RBP17.99■□□□□ 0.47
PRKN-201ENST00000338468 SLC1A4P43007 532 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 KCTD1Q719H9 257 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 TTC14Q96N46 770 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 ZKSCAN3Q9BRR0 538 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 RIPK3Q9Y572 518 aa17.99■□□□□ 0.47
PRKN-201ENST00000338468 CYP21A2P08686 494 aa17.98■□□□□ 0.47
PRKN-201ENST00000338468 PRKAR2AP13861 404 aaKnown RBP17.98■□□□□ 0.47
PRKN-201ENST00000338468 STAT2P52630 851 aa17.98■□□□□ 0.47
PRKN-201ENST00000338468 CACNB2Q08289 660 aaPredicted RBP17.98■□□□□ 0.47
PRKN-201ENST00000338468 TRMT44Q8IYL2 757 aaKnown RBP17.98■□□□□ 0.47
PRKN-201ENST00000338468 ABRAQ8N0Z2 381 aa17.98■□□□□ 0.47
PRKN-201ENST00000338468 TEX13BQ9BXU2 312 aa17.98■□□□□ 0.47
PRKN-201ENST00000338468 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.98■□□□□ 0.47
PRKN-201ENST00000338468 ZSWIM5Q9P217 1185 aa17.98■□□□□ 0.47
PRKN-201ENST00000338468 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
PRKN-201ENST00000338468 RPTORQ8N122 1335 aa17.98■□□□□ 0.47
PRKN-201ENST00000338468 SOX1O00570 391 aaPredicted RBP17.97■□□□□ 0.47
PRKN-201ENST00000338468 ZBED4O75132 1171 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 NT5C2P49902 561 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 SNRNP48Q6IEG0 339 aaKnown RBP17.97■□□□□ 0.47
PRKN-201ENST00000338468 TTBK2Q6IQ55 1244 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 FAM160B2Q86V87 743 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 DCAF4Q8WV16 495 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 ANKS1AQ92625 1134 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 MAP4K1Q92918 833 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 ESYT1Q9BSJ8 1104 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 CRISPLD2Q9H0B8 497 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 RAVER2Q9HCJ3 691 aaKnown RBP17.97■□□□□ 0.47
PRKN-201ENST00000338468 U3KPZ7 1027 aaPredicted RBP17.97■□□□□ 0.47
PRKN-201ENST00000338468 ZNF536O15090 1300 aa17.97■□□□□ 0.47
PRKN-201ENST00000338468 SNHG28P0DPA3 235 aa17.96■□□□□ 0.47
PRKN-201ENST00000338468 PDHBP11177 359 aa17.96■□□□□ 0.47
PRKN-201ENST00000338468 FCER1AP12319 257 aa17.96■□□□□ 0.47
PRKN-201ENST00000338468 DGKHQ86XP1 1220 aa17.96■□□□□ 0.47
PRKN-201ENST00000338468 CPXCR1Q8N123 301 aa17.96■□□□□ 0.47
PRKN-201ENST00000338468 CHURC1Q8WUH1 139 aa17.96■□□□□ 0.47
PRKN-201ENST00000338468 LRCH3Q96II8 777 aa17.96■□□□□ 0.47
PRKN-201ENST00000338468 LSG1Q9H089 658 aaKnown RBP17.96■□□□□ 0.47
PRKN-201ENST00000338468 HMX1Q9NP08 348 aaPredicted RBP17.96■□□□□ 0.47
PRKN-201ENST00000338468 A0A0C4DFX4 3053 aa17.96■□□□□ 0.47
PRKN-201ENST00000338468 ZNFX1Q9P2E3 1918 aaKnown RBP17.96■□□□□ 0.47
PRKN-201ENST00000338468 NEFLP07196 543 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 CCND3P30281 292 aaPredicted RBP17.95■□□□□ 0.46
PRKN-201ENST00000338468 COPB2P35606 906 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 OAZ1P54368 228 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 BTNL9Q6UXG8 535 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 STOX1Q6ZVD7 989 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 CYB5R4Q7L1T6 521 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 NECAB2Q7Z6G3 386 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 DPP9Q86TI2 863 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 ENAHQ8N8S7 591 aaPredicted RBP17.95■□□□□ 0.46
PRKN-201ENST00000338468 PAWRQ96IZ0 340 aaKnown RBP17.95■□□□□ 0.46
PRKN-201ENST00000338468 ZSCAN10Q96SZ4 725 aaPredicted RBP17.95■□□□□ 0.46
PRKN-201ENST00000338468 MMP19Q99542 508 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 KRT23Q9C075 422 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 CNNM2Q9H8M5 875 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 PRR12Q9ULL5 1215 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 ISY1Q9ULR0 285 aaKnown RBP17.95■□□□□ 0.46
PRKN-201ENST00000338468 CUL9Q8IWT3 2517 aa17.95■□□□□ 0.46
PRKN-201ENST00000338468 PGK2P07205 417 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 FDX1P10109 184 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 CYP2C19P33261 490 aa17.94■□□□□ 0.46
PRKN-201ENST00000338468 SLC16A2P36021 539 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms