RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 JAKMIP3Q5VZ66 844 aa26.27■■□□□ 1.8
CLPTM1-201ENST00000337392 FERMT2Q96AC1 680 aa26.27■■□□□ 1.8
CLPTM1-201ENST00000337392 E2F4Q16254 413 aa26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 LETM2Q2VYF4 491 aa26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 TTBK2Q6IQ55 1244 aa26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 APOBEC3HQ6NTF7 200 aaKnown RBP26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 PDCL3Q9H2J4 239 aa26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 PLCG2P16885 1265 aa26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 CDK11BP21127 795 aaKnown RBP26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 RBM5P52756 815 aaKnown RBP eCLIP26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 MYRIPQ8NFW9 859 aa26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 SPATA20Q8TB22 786 aa26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 HOOK1Q9UJC3 728 aaKnown RBP26.26■■□□□ 1.79
CLPTM1-201ENST00000337392 OSBPL5Q9H0X9 879 aaPredicted RBP26.25■■□□□ 1.79
CLPTM1-201ENST00000337392 SMCO2A6NFE2 343 aa26.25■■□□□ 1.79
CLPTM1-201ENST00000337392 PDHBP11177 359 aa26.25■■□□□ 1.79
CLPTM1-201ENST00000337392 SH3RF1Q7Z6J0 888 aa26.25■■□□□ 1.79
CLPTM1-201ENST00000337392 C2CD5Q86YS7 1000 aa26.25■■□□□ 1.79
CLPTM1-201ENST00000337392 CALML3P27482 149 aa26.24■■□□□ 1.79
CLPTM1-201ENST00000337392 MTMR4Q9NYA4 1195 aa26.24■■□□□ 1.79
CLPTM1-201ENST00000337392 LRRC37AA6NMS7 1700 aa26.24■■□□□ 1.79
CLPTM1-201ENST00000337392 SFPQP23246 707 aaKnown RBP eCLIP26.24■■□□□ 1.79
CLPTM1-201ENST00000337392 NAA30Q147X3 362 aaPredicted RBP26.24■■□□□ 1.79
CLPTM1-201ENST00000337392 CREBRFQ8IUR6 639 aa26.24■■□□□ 1.79
CLPTM1-201ENST00000337392 GABPAQ06546 454 aa26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 E4F1Q66K89 784 aaPredicted RBP26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 TMED8Q6PL24 325 aaPredicted RBP26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 KCTD1Q719H9 257 aa26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 EEF2KMTQ96G04 330 aa26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 MASTLQ96GX5 879 aa26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 ZNF287Q9HBT7 754 aa26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 TOP1P11387 765 aaKnown RBP26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 PDXDC2PQ6P474 469 aa26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 SLF2Q8IX21 1173 aa26.23■■□□□ 1.79
CLPTM1-201ENST00000337392 CCNT1O60563 726 aaKnown RBP26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 RASSF8Q8NHQ8 419 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 GJA10Q969M2 543 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 SERPINB13Q9UIV8 391 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 SCN9AQ15858 1988 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 PLSCR1O15162 318 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 ZBTB22O15209 634 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 TEX33O43247 280 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 SHMT1P34896 483 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 GNAQP50148 359 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 DNAJC18Q9H819 358 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 GDAQ9Y2T3 454 aa26.22■■□□□ 1.79
CLPTM1-201ENST00000337392 PDE6BP35913 854 aa26.21■■□□□ 1.79
CLPTM1-201ENST00000337392 ADKP55263 362 aaKnown RBP26.21■■□□□ 1.79
CLPTM1-201ENST00000337392 AOC3Q16853 763 aa26.21■■□□□ 1.79
CLPTM1-201ENST00000337392 MLKLQ8NB16 471 aa26.21■■□□□ 1.79
CLPTM1-201ENST00000337392 ZNF18P17022 549 aa26.21■■□□□ 1.79
CLPTM1-201ENST00000337392 ALDH1B1P30837 517 aa26.21■■□□□ 1.79
CLPTM1-201ENST00000337392 CRKP46108 304 aa26.21■■□□□ 1.79
CLPTM1-201ENST00000337392 CTNND2Q9UQB3 1225 aa26.21■■□□□ 1.79
CLPTM1-201ENST00000337392 DDTLA6NHG4 134 aaPredicted RBP26.2■■□□□ 1.79
CLPTM1-201ENST00000337392 RRP36Q96EU6 259 aaKnown RBP26.2■■□□□ 1.79
CLPTM1-201ENST00000337392 DHX8Q14562 1220 aaKnown RBP26.2■■□□□ 1.78
CLPTM1-201ENST00000337392 NAALADL2Q58DX5 795 aa26.2■■□□□ 1.78
CLPTM1-201ENST00000337392 VSTM4Q8IW00 320 aa26.2■■□□□ 1.78
CLPTM1-201ENST00000337392 CCAR2Q8N163 923 aaKnown RBP26.2■■□□□ 1.78
CLPTM1-201ENST00000337392 PPP1R3GB7ZBB8 358 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 TAL1P17542 331 aaPredicted RBP26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 TRAPPC10P48553 1259 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 TERF1P54274 439 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 EN1Q05925 392 aaPredicted RBP26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 KANK3Q6NY19 840 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 TEKT1Q969V4 418 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 SPZ1Q9BXG8 430 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 SH3GLB2Q9NR46 395 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 SLX4Q8IY92 1834 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 EZH2Q15910 746 aaKnown RBP26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 IQUBQ8NA54 791 aa26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 SEC63Q9UGP8 760 aaKnown RBP26.19■■□□□ 1.78
CLPTM1-201ENST00000337392 BMP15O95972 392 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 UBE2SQ16763 222 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 DTHD1Q6ZMT9 781 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 ZSCAN29Q8IWY8 852 aaPredicted RBP26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 TBCKQ8TEA7 893 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 ZMYND12Q9H0C1 365 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 PPP1R11O60927 126 aaPredicted RBP26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 STAT6P42226 847 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 GSDMDP57764 484 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 SNAP25P60880 206 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 CCDC148Q8NFR7 591 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 ENOX1Q8TC92 643 aaKnown RBP26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 ECE2O60344 883 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 POTEDQ86YR6 584 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 ELOA2Q8IYF1 753 aaPredicted RBP26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 PRIMPOLQ96LW4 560 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 IMPACTQ9P2X3 320 aa26.18■■□□□ 1.78
CLPTM1-201ENST00000337392 SYNRGQ9UMZ2 1314 aa26.17■■□□□ 1.78
CLPTM1-201ENST00000337392 CCDC178Q5BJE1 867 aa26.17■■□□□ 1.78
CLPTM1-201ENST00000337392 RRAGBQ5VZM2 374 aa26.17■■□□□ 1.78
CLPTM1-201ENST00000337392 ZNF710Q8N1W2 664 aa26.17■■□□□ 1.78
CLPTM1-201ENST00000337392 TECP42680 631 aa26.17■■□□□ 1.78
CLPTM1-201ENST00000337392 CPLX3Q8WVH0 158 aa26.17■■□□□ 1.78
CLPTM1-201ENST00000337392 TRIM49BA6NDI0 452 aa26.16■■□□□ 1.78
CLPTM1-201ENST00000337392 CCT6AP40227 531 aaKnown RBP26.16■■□□□ 1.78
CLPTM1-201ENST00000337392 CEP135Q66GS9 1140 aa26.16■■□□□ 1.78
CLPTM1-201ENST00000337392 SH3BP5LQ7L8J4 393 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms