RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 LRRIQ3A6PVS8 624 aaPredicted RBP17.74■□□□□ 0.43
NPHP3-201ENST00000337331 EIF3HO15372 352 aaKnown RBP eCLIP17.74■□□□□ 0.43
NPHP3-201ENST00000337331 C2orf54Q08AI8 447 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
NPHP3-201ENST00000337331 PLA2R1Q13018 1463 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 MAGEA1P43355 309 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 TBC1D1Q86TI0 1168 aaPredicted RBP17.74■□□□□ 0.43
NPHP3-201ENST00000337331 NOA1Q8NC60 698 aaKnown RBP17.74■□□□□ 0.43
NPHP3-201ENST00000337331 CCDC77Q9BR77 488 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 LRWD1Q9UFC0 647 aa17.74■□□□□ 0.43
NPHP3-201ENST00000337331 USP17L12C9JPN9 530 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 USP17L21D6R901 530 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 PLCB3Q01970 1234 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 DYMQ7RTS9 669 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 CLIC6Q96NY7 704 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 DBN1Q16643 649 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 CCDC38Q502W7 563 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 NBPF14Q5TI25 921 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 CCDC25Q86WR0 208 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 HNRNPLLQ8WVV9 542 aaKnown RBP17.73■□□□□ 0.43
NPHP3-201ENST00000337331 TSGA10Q9BZW7 698 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 EPN1Q9Y6I3 576 aaPredicted RBP17.73■□□□□ 0.43
NPHP3-201ENST00000337331 IGSF1Q8N6C5 1336 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 ZFYVE16Q7Z3T8 1539 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 CAND2O75155 1236 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 RWDD2BP57060 319 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 TFAP4Q01664 338 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 PAK2Q13177 524 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 NONOQ15233 471 aaKnown RBP eCLIP17.73■□□□□ 0.43
NPHP3-201ENST00000337331 FAM47AQ5JRC9 791 aa17.73■□□□□ 0.43
NPHP3-201ENST00000337331 SAMSN1Q9NSI8 373 aaKnown RBP17.73■□□□□ 0.43
NPHP3-201ENST00000337331 A0A1W2PQ27 194 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 A0A1W2PQ64 194 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 A0A1W2PQD8 194 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 NR1D1P20393 614 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 ZBTB21Q9ULJ3 1066 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 SYNMO15061 1565 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 GUCY1A3Q02108 690 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 TTLL12Q14166 644 aaPredicted RBP17.72■□□□□ 0.43
NPHP3-201ENST00000337331 HOMEZQ8IX15 550 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 IFNL3Q8IZI9 196 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 SH2D3CQ8N5H7 860 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 NELFBQ8WX92 580 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 MRPL44Q9H9J2 332 aaKnown RBP17.72■□□□□ 0.43
NPHP3-201ENST00000337331 FAM184BQ9ULE4 1060 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 MROH5Q6ZUA9 1318 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 EEF2P13639 858 aaKnown RBP17.72■□□□□ 0.43
NPHP3-201ENST00000337331 HERC4Q5GLZ8 1057 aaPredicted RBP17.72■□□□□ 0.43
NPHP3-201ENST00000337331 SYNCQ9H7C4 482 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 HAUS2Q9NVX0 235 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 CETN3O15182 167 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 HIP1RO75146 1068 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 UFL1O94874 794 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 SNX29Q8TEQ0 813 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 PUS3Q9BZE2 481 aaKnown RBP17.72■□□□□ 0.43
NPHP3-201ENST00000337331 ATP6V0A2Q9Y487 856 aa17.72■□□□□ 0.43
NPHP3-201ENST00000337331 TRIM65Q6PJ69 517 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 FANCBQ8NB91 859 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 IFT74Q96LB3 600 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 UIMC1Q96RL1 719 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 EHD4Q9H223 541 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 CFAP74Q9C0B2 1584 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 PRAMEF22A3QJZ6 481 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 KRT71Q3SY84 523 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 KLHL7Q8IXQ5 586 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 RIMBP3CA6NJZ7 1639 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 RIMBP3BA6NNM3 1639 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 RIMBP3Q9UFD9 1639 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 CCDC160A6NGH7 325 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 PPARAQ07869 468 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 RUFY4Q6ZNE9 571 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 CNBD1Q8NA66 436 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 HAUS4Q9H6D7 363 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 HDAC6Q9UBN7 1215 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 ADGRG1Q9Y653 693 aa17.71■□□□□ 0.43
NPHP3-201ENST00000337331 COBLO75128 1261 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 RSRC2Q7L4I2 434 aaKnown RBP17.7■□□□□ 0.42
NPHP3-201ENST00000337331 IL17RAQ96F46 866 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 NUP58Q9BVL2 599 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 DNAI2Q9GZS0 605 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 VCXQ9H320 206 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 SLC40A1Q9NP59 571 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 CCDC87Q9NVE4 849 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 ADCY9O60503 1353 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 LINC00301Q8NCQ3 95 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 SDR42E1Q8WUS8 393 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 RTEL1Q9NZ71 1219 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 SWAP70Q9UH65 585 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 CTSWP56202 376 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 FMR1NBQ8N0W7 255 aaPredicted RBP17.7■□□□□ 0.42
NPHP3-201ENST00000337331 WDR66Q8TBY9 1149 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 IMPG2Q9BZV3 1241 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 AP1G2O75843 785 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 TAF11Q15544 211 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 FAM133BQ5BKY9 247 aaKnown RBP17.7■□□□□ 0.42
NPHP3-201ENST00000337331 FAM207AQ9NSI2 230 aaPredicted RBP17.7■□□□□ 0.42
NPHP3-201ENST00000337331 HPCAL4Q9UM19 191 aa17.7■□□□□ 0.42
NPHP3-201ENST00000337331 MLH3Q9UHC1 1453 aa17.69■□□□□ 0.42
NPHP3-201ENST00000337331 ERVV-2B6SEH9 535 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms