RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 COL11A1P12107 1806 aaPredicted RBP13.4□□□□□ -0.26
MRPL55-203ENST00000336520 RAD50Q92878 1312 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 ZNF236Q9UL36 1845 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 TMEM232C9JQI7 657 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 CAPN2P17655 700 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 STAT2P52630 851 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 KCTD2Q14681 263 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 CCDC96Q2M329 555 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 PRPF38BQ5VTL8 546 aaKnown RBP13.39□□□□□ -0.27
MRPL55-203ENST00000336520 CPXCR1Q8N123 301 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 REPS2Q8NFH8 660 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 NPLOC4Q8TAT6 608 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 CHURC1Q8WUH1 139 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 ESR2Q92731 530 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 FLRT1Q9NZU1 646 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 NEDD4P46934 1319 aa13.39□□□□□ -0.27
MRPL55-203ENST00000336520 COBLO75128 1261 aa13.38□□□□□ -0.27
MRPL55-203ENST00000336520 TOP1P11387 765 aaKnown RBP13.38□□□□□ -0.27
MRPL55-203ENST00000336520 CHMLP26374 656 aa13.38□□□□□ -0.27
MRPL55-203ENST00000336520 CYP2C19P33261 490 aa13.38□□□□□ -0.27
MRPL55-203ENST00000336520 KCTD1Q719H9 257 aa13.38□□□□□ -0.27
MRPL55-203ENST00000336520 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
MRPL55-203ENST00000336520 FAM160B2Q86V87 743 aa13.38□□□□□ -0.27
MRPL55-203ENST00000336520 CRISPLD2Q9H0B8 497 aa13.38□□□□□ -0.27
MRPL55-203ENST00000336520 SLC38A10Q9HBR0 1119 aa13.38□□□□□ -0.27
MRPL55-203ENST00000336520 RAVER2Q9HCJ3 691 aaKnown RBP13.38□□□□□ -0.27
MRPL55-203ENST00000336520 LAMA4Q16363 1823 aa13.38□□□□□ -0.27
MRPL55-203ENST00000336520 ATP2A1O14983 1001 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 FDX1P10109 184 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 CNGA1P29973 690 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 CCND3P30281 292 aaPredicted RBP13.37□□□□□ -0.27
MRPL55-203ENST00000336520 OLFML2BQ68BL8 750 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 RCSD1Q6JBY9 416 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 DCAF4Q8WV16 495 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 TMEM47Q9BQJ4 181 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 HTATIP2Q9BUP3 242 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 IL25Q9H293 177 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 TCP11L1Q9NUJ3 509 aa13.37□□□□□ -0.27
MRPL55-203ENST00000336520 BRCA2P51587 3418 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 B4E1Z4 1266 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 KDM4AO75164 1064 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 PGK2P07205 417 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 NOVP48745 357 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 NT5C2P49902 561 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 OAZ1P54368 228 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 RASGRP2Q7LDG7 609 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 UBE2Q1Q7Z7E8 422 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 IQCA1Q86XH1 822 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 ANKLE1Q8NAG6 615 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 DPF3Q92784 378 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 ZKSCAN3Q9BRR0 538 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 HOMER2Q9NSB8 354 aa13.36□□□□□ -0.27
MRPL55-203ENST00000336520 CEP290O15078 2479 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 PLA2G6O60733 806 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 NECAB2Q7Z6G3 386 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 DDX11Q96FC9 970 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 PAWRQ96IZ0 340 aaKnown RBP13.35□□□□□ -0.27
MRPL55-203ENST00000336520 MAML3Q96JK9 1138 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 TTC14Q96N46 770 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 KRT23Q9C075 422 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 CNNM2Q9H8M5 875 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 GPCPD1Q9NPB8 672 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 FBXO40Q9UH90 709 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 OGDHLQ9ULD0 1010 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 RIPK3Q9Y572 518 aa13.35□□□□□ -0.27
MRPL55-203ENST00000336520 MKI67P46013 3256 aaKnown RBP13.35□□□□□ -0.27
MRPL55-203ENST00000336520 MSCO60682 206 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 NEFLP07196 543 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 CYBAP13498 195 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 CCDC174Q6PII3 467 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 CHST13Q8NET6 341 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 DIS3LQ8TF46 1054 aaKnown RBP13.34□□□□□ -0.27
MRPL55-203ENST00000336520 CCDC136Q96JN2 1154 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 UBAC1Q9BSL1 405 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 DDX20Q9UHI6 824 aaKnown RBP13.34□□□□□ -0.27
MRPL55-203ENST00000336520 PRR12Q9ULL5 1215 aa13.34□□□□□ -0.27
MRPL55-203ENST00000336520 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-203ENST00000336520 FRMPD2Q68DX3 1309 aaPredicted RBP13.34□□□□□ -0.27
MRPL55-203ENST00000336520 SGSM2O43147 1006 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 PDHBP11177 359 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 ALAS1P13196 640 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 SLC16A2P36021 539 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 SNAP25P60880 206 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 PTH1RQ03431 593 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 TRDNQ13061 729 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 ZNF792Q3KQV3 632 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 SYDE2Q5VT97 1194 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 TTBK2Q6IQ55 1244 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 KIAA1211Q6ZU35 1233 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 DGKHQ86XP1 1220 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 TRPV1Q8NER1 839 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 AGBL1Q96MI9 1066 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 ZSCAN10Q96SZ4 725 aaPredicted RBP13.33□□□□□ -0.28
MRPL55-203ENST00000336520 ACAD9Q9H845 621 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 KAT14Q9H8E8 782 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 RNF146Q9NTX7 359 aa13.33□□□□□ -0.28
MRPL55-203ENST00000336520 DIS3Q9Y2L1 958 aaKnown RBP13.33□□□□□ -0.28
MRPL55-203ENST00000336520 ZNFX1Q9P2E3 1918 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms