RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 PDXDC2PQ6P474 469 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 PLIN4Q96Q06 1357 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 NRDCO43847 1150 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 CDK11BP21127 795 aaKnown RBP19.74■□□□□ 0.75
DDX28-201ENST00000332395 GABPAQ06546 454 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 DOK7Q18PE1 504 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 INF2Q27J81 1249 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 NYAP1Q6ZVC0 841 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 ZMYND12Q9H0C1 365 aa19.74■□□□□ 0.75
DDX28-201ENST00000332395 TRMT1Q9NXH9 659 aaKnown RBP19.74■□□□□ 0.75
DDX28-201ENST00000332395 MMP10P09238 476 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 SMARCA1P28370 1054 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 NAPAP54920 295 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 HOMER1Q86YM7 354 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 CCDC12Q8WUD4 166 aaPredicted RBP19.73■□□□□ 0.75
DDX28-201ENST00000332395 STAMQ92783 540 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 RRP36Q96EU6 259 aaKnown RBP19.73■□□□□ 0.75
DDX28-201ENST00000332395 MXD3Q9BW11 206 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 DDX4Q9NQI0 724 aaKnown RBP19.73■□□□□ 0.75
DDX28-201ENST00000332395 APBA3O96018 575 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 CD44P16070 742 aaKnown RBP19.73■□□□□ 0.75
DDX28-201ENST00000332395 TXLNAP40222 546 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 DMTNQ08495 405 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 SAMSN1Q9NSI8 373 aaKnown RBP19.73■□□□□ 0.75
DDX28-201ENST00000332395 PARP3Q9Y6F1 533 aa19.73■□□□□ 0.75
DDX28-201ENST00000332395 USP17L5A8MUK1 530 aa19.72■□□□□ 0.75
DDX28-201ENST00000332395 KCNJ6P48051 423 aa19.72■□□□□ 0.75
DDX28-201ENST00000332395 CUL4BQ13620 913 aa19.72■□□□□ 0.75
DDX28-201ENST00000332395 PTPN14Q15678 1187 aa19.72■□□□□ 0.75
DDX28-201ENST00000332395 CEP135Q66GS9 1140 aa19.72■□□□□ 0.75
DDX28-201ENST00000332395 E4F1Q66K89 784 aaPredicted RBP19.72■□□□□ 0.75
DDX28-201ENST00000332395 MASTLQ96GX5 879 aa19.72■□□□□ 0.75
DDX28-201ENST00000332395 PRDM10Q9NQV6 1147 aa19.72■□□□□ 0.75
DDX28-201ENST00000332395 MTMR4Q9NYA4 1195 aa19.72■□□□□ 0.75
DDX28-201ENST00000332395 SEC63Q9UGP8 760 aaKnown RBP19.72■□□□□ 0.75
DDX28-201ENST00000332395 SYNRGQ9UMZ2 1314 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 PTPN21Q16825 1174 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 KLHL10Q6JEL2 608 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 DTHD1Q6ZMT9 781 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 FLAD1Q8NFF5 587 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 TSC1Q92574 1164 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 MTRQ99707 1265 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 TMX4Q9H1E5 349 aaPredicted RBP19.71■□□□□ 0.75
DDX28-201ENST00000332395 BLZF1Q9H2G9 400 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 TMEM60Q9H2L4 133 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 USP40Q9NVE5 1235 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 PAXBP1Q9Y5B6 917 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 MYH8P13535 1937 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 PDHBP11177 359 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 CDC25AP30304 524 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 SCNN1DP51172 638 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 SMYD4Q8IYR2 804 aaPredicted RBP19.71■□□□□ 0.75
DDX28-201ENST00000332395 ADAMTSL1Q8N6G6 1762 aa19.71■□□□□ 0.75
DDX28-201ENST00000332395 PPP1R3GB7ZBB8 358 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 G3V3G9 751 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 GTPBP6O43824 516 aaPredicted RBP19.7■□□□□ 0.74
DDX28-201ENST00000332395 AKR1B1P15121 316 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 GNA11P29992 359 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 DCAF8Q5TAQ9 597 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 SPATA1Q5VX52 437 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 CCDC112Q8NEF3 446 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 PIGSQ96S52 555 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 VAT1LQ9HCJ6 419 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 C6orf50Q9HD87 102 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 SMCO2A6NFE2 343 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 LAD1O00515 517 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 ZSCAN20P17040 1043 aaPredicted RBP19.7■□□□□ 0.74
DDX28-201ENST00000332395 KRT25Q7Z3Z0 450 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 SERPINB13Q9UIV8 391 aa19.7■□□□□ 0.74
DDX28-201ENST00000332395 IGKV6D-41A0A0C4DH26 115 aa19.69■□□□□ 0.74
DDX28-201ENST00000332395 PSDA5PKW4 1024 aaPredicted RBP19.69■□□□□ 0.74
DDX28-201ENST00000332395 STAT6P42226 847 aa19.69■□□□□ 0.74
DDX28-201ENST00000332395 STX17P56962 302 aa19.69■□□□□ 0.74
DDX28-201ENST00000332395 KARSQ15046 597 aaKnown RBP19.69■□□□□ 0.74
DDX28-201ENST00000332395 HHIPL2Q6UWX4 724 aa19.69■□□□□ 0.74
DDX28-201ENST00000332395 LRRC47Q8N1G4 583 aaKnown RBP19.69■□□□□ 0.74
DDX28-201ENST00000332395 UBA5Q9GZZ9 404 aa19.69■□□□□ 0.74
DDX28-201ENST00000332395 RIOX1Q9H6W3 641 aa19.69■□□□□ 0.74
DDX28-201ENST00000332395 DISC1Q9NRI5 854 aa19.69■□□□□ 0.74
DDX28-201ENST00000332395 SWAP70Q9UH65 585 aa19.69■□□□□ 0.74
DDX28-201ENST00000332395 SOGA3Q5TF21 947 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 CDC42EP5Q6NZY7 148 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 ZNF592Q92610 1267 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 TEKT1Q969V4 418 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 TMX1Q9H3N1 280 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 FRMPD2Q68DX3 1309 aaPredicted RBP19.68■□□□□ 0.74
DDX28-201ENST00000332395 PRPHP41219 470 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 EIF6P56537 245 aaKnown RBP19.68■□□□□ 0.74
DDX28-201ENST00000332395 TBX2Q13207 712 aaPredicted RBP19.68■□□□□ 0.74
DDX28-201ENST00000332395 NONOQ15233 471 aaKnown RBP eCLIP19.68■□□□□ 0.74
DDX28-201ENST00000332395 ASPRV1Q53RT3 343 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 MSL1Q68DK7 614 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 APOBEC3HQ6NTF7 200 aaKnown RBP19.68■□□□□ 0.74
DDX28-201ENST00000332395 ZNF622Q969S3 477 aaKnown RBP eCLIP19.68■□□□□ 0.74
DDX28-201ENST00000332395 PPP1R13BQ96KQ4 1090 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 MYO3BQ8WXR4 1341 aa19.68■□□□□ 0.74
DDX28-201ENST00000332395 PP2D1A8MPX8 630 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 GOLGA8FQ08AF8 430 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 GOLGA8DPQ0D2H9 430 aa19.67■□□□□ 0.74
DDX28-201ENST00000332395 SPECC1LQ69YQ0 1117 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 128.8 ms