RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 TAOK1Q7L7X3 1001 aa11.63□□□□□ -0.55
CLN8-201ENST00000331222 DHX29Q7Z478 1369 aaKnown RBP11.63□□□□□ -0.55
CLN8-201ENST00000331222 TNNC2P02585 160 aa11.63□□□□□ -0.55
CLN8-201ENST00000331222 SZRD1Q7Z422 152 aa11.63□□□□□ -0.55
CLN8-201ENST00000331222 ADCY8P40145 1251 aa11.63□□□□□ -0.55
CLN8-201ENST00000331222 CERKLQ49MI3 558 aaPredicted RBP11.63□□□□□ -0.55
CLN8-201ENST00000331222 LCA5Q86VQ0 697 aa11.63□□□□□ -0.55
CLN8-201ENST00000331222 TEKT1Q969V4 418 aa11.63□□□□□ -0.55
CLN8-201ENST00000331222 SH3TC1Q8TE82 1336 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 ALDH1B1P30837 517 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 HDAC1Q13547 482 aaPredicted RBP11.62□□□□□ -0.55
CLN8-201ENST00000331222 SNX1Q13596 522 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 CDC37L1Q7L3B6 337 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 ATF5Q9Y2D1 282 aaPredicted RBP11.62□□□□□ -0.55
CLN8-201ENST00000331222 DKC1O60832 514 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLN8-201ENST00000331222 BCAMP50895 628 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 ANO4Q32M45 955 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 SUCLG2Q96I99 432 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 DPH5Q9H2P9 285 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 KDM5BQ9UGL1 1544 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 PLBD2Q8NHP8 589 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 PLEKHG3A1L390 1219 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 OPHN1O60890 802 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 NONOQ15233 471 aaKnown RBP eCLIP11.62□□□□□ -0.55
CLN8-201ENST00000331222 ELF2Q15723 593 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 ZBTB33Q86T24 672 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 C7orf31Q8N865 590 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 METTL22Q9BUU2 404 aaPredicted RBP11.62□□□□□ -0.55
CLN8-201ENST00000331222 DDX25Q9UHL0 483 aaKnown RBP11.62□□□□□ -0.55
CLN8-201ENST00000331222 ITM2BQ9Y287 266 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 GADD45BO75293 160 aaPredicted RBP11.62□□□□□ -0.55
CLN8-201ENST00000331222 INPP1P49441 399 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 DMP1Q13316 513 aaPredicted RBP11.62□□□□□ -0.55
CLN8-201ENST00000331222 RPS6KA1Q15418 735 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 KIAA1841Q6NSI8 718 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 PPM1KQ8N3J5 372 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 RAB20Q9NX57 234 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 SLC5A4Q9NY91 659 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 CCPG1Q9ULG6 757 aa11.62□□□□□ -0.55
CLN8-201ENST00000331222 YTHDC2Q9H6S0 1430 aaKnown RBP11.62□□□□□ -0.55
CLN8-201ENST00000331222 ZNF853P0CG23 659 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 PDCD7Q8N8D1 485 aaKnown RBP11.61□□□□□ -0.55
CLN8-201ENST00000331222 PSTPIP2Q9H939 334 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 ATP1A2P50993 1020 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 DYNLT1P63172 113 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 CDR2Q01850 454 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 DNAJC10Q8IXB1 793 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 CCDC68Q9H2F9 335 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 MIGA2Q7L4E1 593 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 PI4K2BQ8TCG2 481 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 PSPC1Q8WXF1 523 aaKnown RBP11.61□□□□□ -0.55
CLN8-201ENST00000331222 PCDHB4Q9Y5E5 795 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 H7C0C1 242 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 SGK1O00141 431 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 ATP5OP48047 213 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 SKIV2LQ15477 1246 aaKnown RBP11.61□□□□□ -0.55
CLN8-201ENST00000331222 HABP4Q5JVS0 413 aaKnown RBP11.61□□□□□ -0.55
CLN8-201ENST00000331222 REXO1Q8N1G1 1221 aaKnown RBP11.61□□□□□ -0.55
CLN8-201ENST00000331222 ADPGKQ9BRR6 497 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 SLC39A2Q9NP94 309 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 ANGPTL3Q9Y5C1 460 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 POC1B-GALNT4F8VUJ3 575 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 SPECC1L-ADORA2AF8WAN1 911 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 MAGEA1P43355 309 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 MAST3O60307 1309 aa11.61□□□□□ -0.55
CLN8-201ENST00000331222 MAPKBP1O60336 1514 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 AS3MTQ9HBK9 375 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 LMCD1Q9NZU5 365 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 PCDHA12Q9UN75 941 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 EYA2O00167 538 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 ZBTB8OSQ8IWT0 167 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 APPBP2Q92624 585 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 PGBD1Q96JS3 809 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 CBX8Q9HC52 389 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 KIAA0586Q9BVV6 1533 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 FRMD3A2A2Y4 597 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 USP17L12C9JPN9 530 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 USP17L21D6R901 530 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 SOS1Q07889 1333 aaPredicted RBP11.6□□□□□ -0.55
CLN8-201ENST00000331222 ZBTB41Q5SVQ8 909 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 SLITRK6Q9H5Y7 841 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 HACD3Q9P035 362 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 TLR3O15455 904 aaKnown RBP11.6□□□□□ -0.55
CLN8-201ENST00000331222 RSRC2Q7L4I2 434 aaKnown RBP11.6□□□□□ -0.55
CLN8-201ENST00000331222 IFIH1Q9BYX4 1025 aaKnown RBP11.6□□□□□ -0.55
CLN8-201ENST00000331222 SERPINB6P35237 376 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 GNPTABQ3T906 1256 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 SUPT20HQ8NEM7 779 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 NLRP7Q8WX94 980 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 ATP6V1E2Q96A05 226 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 USP26Q9BXU7 913 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 SERTAD1Q9UHV2 236 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 SNX14Q9Y5W7 946 aa11.6□□□□□ -0.55
CLN8-201ENST00000331222 NVLO15381 856 aaKnown RBP11.59□□□□□ -0.55
CLN8-201ENST00000331222 KCNA6P17658 529 aa11.59□□□□□ -0.55
CLN8-201ENST00000331222 CLNS1AP54105 237 aaKnown RBP11.59□□□□□ -0.55
CLN8-201ENST00000331222 LGSNQ5TDP6 509 aa11.59□□□□□ -0.55
CLN8-201ENST00000331222 RAB3IPQ96QF0 476 aaPredicted RBP11.59□□□□□ -0.55
CLN8-201ENST00000331222 DESI2Q9BSY9 194 aa11.59□□□□□ -0.55
CLN8-201ENST00000331222 C19orf44Q9H6X5 657 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms