RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 CXCL9Q07325 125 aa19.37■□□□□ 0.69
DDX41-201ENST00000330503 PNOCQ13519 176 aa19.37■□□□□ 0.69
DDX41-201ENST00000330503 RRP1BQ14684 758 aaKnown RBP19.37■□□□□ 0.69
DDX41-201ENST00000330503 DLGAP5Q15398 846 aa19.37■□□□□ 0.69
DDX41-201ENST00000330503 IL17AQ16552 155 aa19.37■□□□□ 0.69
DDX41-201ENST00000330503 PPP4R3BQ5MIZ7 849 aa19.37■□□□□ 0.69
DDX41-201ENST00000330503 KANSL2Q9H9L4 492 aa19.37■□□□□ 0.69
DDX41-201ENST00000330503 JMJD4Q9H9V9 463 aa19.37■□□□□ 0.69
DDX41-201ENST00000330503 SEC63Q9UGP8 760 aaKnown RBP19.37■□□□□ 0.69
DDX41-201ENST00000330503 HDAC9Q9UKV0 1011 aa19.37■□□□□ 0.69
DDX41-201ENST00000330503 CLRN2A0PK11 232 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 SMCO2A6NFE2 343 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 TCP10L2B9ZVM9 353 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 FOXN1O15353 648 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 MCM7P33993 719 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 NLRP12P59046 1061 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 PLCB2Q00722 1185 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 SEPT2Q15019 361 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 DHX40Q8IX18 779 aaKnown RBP19.36■□□□□ 0.69
DDX41-201ENST00000330503 CNNM3Q8NE01 707 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 EPSTI1Q96J88 318 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 TRIM34Q9BYJ4 488 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 SERTAD1Q9UHV2 236 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 BIN1O00499 593 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 ADGRF4Q8IZF3 695 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 AGBL3Q8NEM8 1001 aa19.36■□□□□ 0.69
DDX41-201ENST00000330503 CCDC194A0A1B0GVG4 234 aa19.35■□□□□ 0.69
DDX41-201ENST00000330503 GDF11O95390 407 aa19.35■□□□□ 0.69
DDX41-201ENST00000330503 R3HDM1Q15032 1099 aaKnown RBP19.35■□□□□ 0.69
DDX41-201ENST00000330503 DPCR1Q3MIW9 517 aa19.35■□□□□ 0.69
DDX41-201ENST00000330503 SPDYE2Q495Y8 402 aa19.35■□□□□ 0.69
DDX41-201ENST00000330503 OGFOD1Q8N543 542 aa19.35■□□□□ 0.69
DDX41-201ENST00000330503 MTMR14Q8NCE2 650 aa19.35■□□□□ 0.69
DDX41-201ENST00000330503 CCDC12Q8WUD4 166 aaPredicted RBP19.35■□□□□ 0.69
DDX41-201ENST00000330503 SGIP1Q9BQI5 828 aa19.35■□□□□ 0.69
DDX41-201ENST00000330503 CNTNAP1P78357 1384 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 A0A087X0B3 334 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 ACTN4O43707 911 aaKnown RBP19.34■□□□□ 0.69
DDX41-201ENST00000330503 ABCB5Q2M3G0 1257 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 TMEM179Q6ZVK1 233 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 KCTD1Q719H9 257 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 FAM151AQ8WW52 585 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 CSRNP1Q96S65 589 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 C6orf50Q9HD87 102 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 CCDC39Q9UFE4 941 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 BRCA1P38398 1863 aaKnown RBP19.34■□□□□ 0.69
DDX41-201ENST00000330503 FER1L6Q2WGJ9 1857 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 NFKBIEO00221 500 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 INF2Q27J81 1249 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 GPATCH4Q5T3I0 446 aaKnown RBP19.34■□□□□ 0.69
DDX41-201ENST00000330503 CEP57L1Q8IYX8 460 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 SYMPKQ92797 1274 aaKnown RBP19.34■□□□□ 0.69
DDX41-201ENST00000330503 COA7Q96BR5 231 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.34■□□□□ 0.69
DDX41-201ENST00000330503 TMOD2Q9NZR1 351 aa19.34■□□□□ 0.69
DDX41-201ENST00000330503 ESYT2A0FGR8 921 aa19.33■□□□□ 0.69
DDX41-201ENST00000330503 VWA3AA6NCI4 1184 aa19.33■□□□□ 0.69
DDX41-201ENST00000330503 GNA11P29992 359 aa19.33■□□□□ 0.69
DDX41-201ENST00000330503 SLC16A2P36021 539 aa19.33■□□□□ 0.69
DDX41-201ENST00000330503 PDILTQ8N807 584 aa19.33■□□□□ 0.69
DDX41-201ENST00000330503 MTMR8Q96EF0 704 aa19.33■□□□□ 0.69
DDX41-201ENST00000330503 ZBED3Q96IU2 234 aaPredicted RBP19.33■□□□□ 0.69
DDX41-201ENST00000330503 PPP1R1BQ9UD71 204 aaPredicted RBP19.33■□□□□ 0.69
DDX41-201ENST00000330503 PNMA6FA0A0J9YX94 578 aa19.33■□□□□ 0.68
DDX41-201ENST00000330503 hCG_1984214I3L0E3 225 aa19.33■□□□□ 0.68
DDX41-201ENST00000330503 PPP1R11O60927 126 aaPredicted RBP19.33■□□□□ 0.68
DDX41-201ENST00000330503 CCDC96Q2M329 555 aa19.33■□□□□ 0.68
DDX41-201ENST00000330503 ISM2Q6H9L7 571 aa19.33■□□□□ 0.68
DDX41-201ENST00000330503 ZSCAN30Q86W11 494 aa19.33■□□□□ 0.68
DDX41-201ENST00000330503 ZNF713Q8N859 430 aaPredicted RBP19.33■□□□□ 0.68
DDX41-201ENST00000330503 TAOK3Q9H2K8 898 aa19.33■□□□□ 0.68
DDX41-201ENST00000330503 PCDHA5Q9Y5H7 936 aa19.33■□□□□ 0.68
DDX41-201ENST00000330503 USP17L10C9JJH3 530 aa19.32■□□□□ 0.68
DDX41-201ENST00000330503 SLFN13Q68D06 897 aa19.32■□□□□ 0.68
DDX41-201ENST00000330503 BPIFA3Q9BQP9 254 aa19.32■□□□□ 0.68
DDX41-201ENST00000330503 NAT10Q9H0A0 1025 aaKnown RBP19.32■□□□□ 0.68
DDX41-201ENST00000330503 GH2P01242 217 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 PRR29P0C7W0 189 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 ICA1Q05084 483 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 ZRSR1Q15695 479 aaKnown RBP19.31■□□□□ 0.68
DDX41-201ENST00000330503 RBM26Q5T8P6 1007 aaKnown RBP19.31■□□□□ 0.68
DDX41-201ENST00000330503 ARL6IP4Q66PJ3 421 aaKnown RBP19.31■□□□□ 0.68
DDX41-201ENST00000330503 KRT25Q7Z3Z0 450 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 DCAF4Q8WV16 495 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 TMEM60Q9H2L4 133 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 FKBP1CQ5VVH2 108 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 CIAPIN1Q6FI81 312 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 PLA2G4DQ86XP0 818 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 GRAMD1CQ8IYS0 662 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 AOPEPQ8N6M6 819 aa19.31■□□□□ 0.68
DDX41-201ENST00000330503 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.31■□□□□ 0.68
DDX41-201ENST00000330503 BIN2Q9UBW5 565 aaPredicted RBP19.31■□□□□ 0.68
DDX41-201ENST00000330503 HERC5Q9UII4 1024 aaKnown RBP19.31■□□□□ 0.68
DDX41-201ENST00000330503 SHTN1A0MZ66 631 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 GOLGA6L19H0YKK7 550 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 ZNF75DP51815 510 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 POSTNQ15063 836 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 TMEM260Q9NX78 707 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 CD2APQ9Y5K6 639 aa19.3■□□□□ 0.68
DDX41-201ENST00000330503 BECN2A8MW95 431 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms