RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 ADAMTS3O15072 1205 aa17.35■□□□□ 0.37
BRCC3-201ENST00000330045 COPB1P53618 953 aaKnown RBP17.35■□□□□ 0.37
BRCC3-201ENST00000330045 CHMP4BP1P59074 171 aa17.35■□□□□ 0.37
BRCC3-201ENST00000330045 ARL6IP4Q66PJ3 421 aaKnown RBP17.35■□□□□ 0.37
BRCC3-201ENST00000330045 RMND1Q9NWS8 449 aa17.35■□□□□ 0.37
BRCC3-201ENST00000330045 CDC23Q9UJX2 597 aa17.35■□□□□ 0.37
BRCC3-201ENST00000330045 COL24A1Q17RW2 1714 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 MYH13Q9UKX3 1938 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 CALML3P27482 149 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 TM4SF1P30408 202 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 LONP1P36776 959 aaKnown RBP17.34■□□□□ 0.37
BRCC3-201ENST00000330045 TCP11X2Q5H9J9 407 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 TPTE2Q6XPS3 522 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 NELFBQ8WX92 580 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 NLRP3Q96P20 1036 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 UBXN6Q9BZV1 441 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 ZSWIM4Q9H7M6 989 aa17.34■□□□□ 0.37
BRCC3-201ENST00000330045 ARPP21Q9UBL0 812 aaPredicted RBP17.34■□□□□ 0.37
BRCC3-201ENST00000330045 BAZ2BQ9UIF8 2168 aaKnown RBP17.34■□□□□ 0.37
BRCC3-201ENST00000330045 CCDC66A2RUB6 948 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 RPN1P04843 607 aaKnown RBP17.33■□□□□ 0.37
BRCC3-201ENST00000330045 CYP2D6P10635 497 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 GYS1P13807 737 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 KIF5BP33176 963 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 TUBB2AQ13885 445 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 TXNRD1Q16881 649 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 CEP112Q8N8E3 955 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 NUP88Q99567 741 aaPredicted RBP17.33■□□□□ 0.37
BRCC3-201ENST00000330045 TUBB2BQ9BVA1 445 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 ABHD10Q9NUJ1 306 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 TAB2Q9NYJ8 693 aa17.33■□□□□ 0.37
BRCC3-201ENST00000330045 PDS5AQ29RF7 1337 aaKnown RBP17.33■□□□□ 0.36
BRCC3-201ENST00000330045 KCNJ18B7U540 433 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 POLR3GO15318 223 aaPredicted RBP17.33■□□□□ 0.36
BRCC3-201ENST00000330045 ERVK-24P63145 666 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 TRIM14Q14142 442 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 KCNJ12Q14500 433 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 KIF4BQ2VIQ3 1234 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 SBK1Q52WX2 424 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 BLIDQ8IZY5 108 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 ACRBPQ8NEB7 543 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 NYXQ9GZU5 481 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 PUF60Q9UHX1 559 aaKnown RBP17.33■□□□□ 0.36
BRCC3-201ENST00000330045 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 KIAA1551Q9HCM1 1747 aa17.33■□□□□ 0.36
BRCC3-201ENST00000330045 CTAGE9A4FU28 777 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 CCDC151A5D8V7 595 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 CYP2C19P33261 490 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 RCSD1Q6JBY9 416 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 CYP26C1Q6V0L0 522 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 C4orf32Q8N8J7 132 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 ERICH4A6NGS2 130 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 PRDX5P30044 214 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 CDC25AP30304 524 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 HIBADHP31937 336 aaKnown RBP17.32■□□□□ 0.36
BRCC3-201ENST00000330045 SLC35F6Q8N357 371 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 FUT8Q9BYC5 575 aa17.32■□□□□ 0.36
BRCC3-201ENST00000330045 RNF225M0QZC1 329 aaPredicted RBP17.31■□□□□ 0.36
BRCC3-201ENST00000330045 STAT6P42226 847 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 PRCPP42785 496 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 RPS8P62241 208 aaKnown RBP17.31■□□□□ 0.36
BRCC3-201ENST00000330045 SMC1AQ14683 1233 aaKnown RBP17.31■□□□□ 0.36
BRCC3-201ENST00000330045 BRD3Q15059 726 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 KAT14Q9H8E8 782 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 TFCP2L1Q9NZI6 479 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 MAPK8IP1Q9UQF2 711 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 GDAQ9Y2T3 454 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 MAST2Q6P0Q8 1798 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 SH3GLB2Q9NR46 395 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 PCDHA4Q9UN74 947 aa17.31■□□□□ 0.36
BRCC3-201ENST00000330045 H7C1D1 291 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 KRT9P35527 623 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 LONRF2Q1L5Z9 754 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 WWC2Q6AWC2 1192 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 PRR5LQ6MZQ0 368 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 FAM205AQ6ZU69 1335 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 ABL1P00519 1130 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 OAS2P29728 719 aaKnown RBP17.3■□□□□ 0.36
BRCC3-201ENST00000330045 UBXN1Q04323 297 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 TXNRD3Q86VQ6 643 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 GPKOWQ92917 476 aaPredicted RBP eCLIP17.3■□□□□ 0.36
BRCC3-201ENST00000330045 ANKZF1Q9H8Y5 726 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 DISC1Q9NRI5 854 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 MCM9Q9NXL9 1143 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.3■□□□□ 0.36
BRCC3-201ENST00000330045 MYH8P13535 1937 aa17.3■□□□□ 0.36
BRCC3-201ENST00000330045 TUBB4BP68371 445 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 TFAP4Q01664 338 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 DTHD1Q6ZMT9 781 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 CNBD1Q8NA66 436 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 NAPGQ99747 312 aaPredicted RBP17.29■□□□□ 0.36
BRCC3-201ENST00000330045 MYO1AQ9UBC5 1043 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 JAG2Q9Y219 1238 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 POTEB2H3BUK9 544 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 PARP1P09874 1014 aaKnown RBP17.29■□□□□ 0.36
BRCC3-201ENST00000330045 DDR1Q08345 913 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 SLC4A8Q2Y0W8 1093 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 DGKHQ86XP1 1220 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 ADSSL1Q8N142 457 aa17.29■□□□□ 0.36
BRCC3-201ENST00000330045 PNMA1Q8ND90 353 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms