RNA–Protein interactions for RNA: ENST00000329970.7

GTF3C6-201, Transcript of general transcription factor IIIC subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C6, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C6-201ENST00000329970 NOVP48745 357 aa16.13■□□□□ 0.17
GTF3C6-201ENST00000329970 TFAP4Q01664 338 aa16.13■□□□□ 0.17
GTF3C6-201ENST00000329970 ARRDC4Q8NCT1 418 aa16.13■□□□□ 0.17
GTF3C6-201ENST00000329970 NUP88Q99567 741 aaPredicted RBP16.13■□□□□ 0.17
GTF3C6-201ENST00000329970 RWDD1Q9H446 243 aaPredicted RBP16.13■□□□□ 0.17
GTF3C6-201ENST00000329970 SLC38A10Q9HBR0 1119 aa16.13■□□□□ 0.17
GTF3C6-201ENST00000329970 LTBP2Q14767 1821 aa16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 ORC4O43929 436 aa16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 PLA2G6O60733 806 aa16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 MCMDC2Q4G0Z9 681 aa16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 SAMD1Q6SPF0 538 aaPredicted RBP16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 CCDC129Q6ZRS4 1044 aa16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 GMCL1Q96IK5 515 aa16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 TINF2Q9BSI4 451 aa16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 OSBPL3Q9H4L5 887 aa16.12■□□□□ 0.17
GTF3C6-201ENST00000329970 DNAJC25-GNG10A0A024R161 153 aa16.11■□□□□ 0.17
GTF3C6-201ENST00000329970 ZBED4O75132 1171 aa16.11■□□□□ 0.17
GTF3C6-201ENST00000329970 BMP3P12645 472 aa16.11■□□□□ 0.17
GTF3C6-201ENST00000329970 LRRC26Q2I0M4 334 aa16.11■□□□□ 0.17
GTF3C6-201ENST00000329970 SNRNP48Q6IEG0 339 aaKnown RBP16.11■□□□□ 0.17
GTF3C6-201ENST00000329970 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
GTF3C6-201ENST00000329970 FBXO40Q9UH90 709 aa16.11■□□□□ 0.17
GTF3C6-201ENST00000329970 TSPY2A6NKD2 308 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 FAM47AQ5JRC9 791 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 VPS53Q5VIR6 699 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 SLFN13Q68D06 897 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 MAMDC4Q6UXC1 1216 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 FAM160B2Q86V87 743 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 LRRC47Q8N1G4 583 aaKnown RBP16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 CHST13Q8NET6 341 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 LNPKQ9C0E8 428 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 SENP6Q9GZR1 1112 aaPredicted RBP16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 ZMYND8Q9ULU4 1186 aaPredicted RBP16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 RIPK3Q9Y572 518 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 SYNGAP1Q96PV0 1343 aa16.1■□□□□ 0.17
GTF3C6-201ENST00000329970 A0A0D9SFI3 127 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 KBTBD13C9JR72 458 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 PGK2P07205 417 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 PCP11498 1178 aaKnown RBP16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 STAT2P52630 851 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 CTDSPL2Q05D32 466 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 SNX17Q15036 470 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 C1orf53Q5VUE5 145 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 CHD1LQ86WJ1 897 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 CHURC1Q8WUH1 139 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 KIFC2Q96AC6 838 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 YTHDC1Q96MU7 727 aaKnown RBP16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 IL17RBQ9NRM6 502 aa16.09■□□□□ 0.17
GTF3C6-201ENST00000329970 FGAP02671 866 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 ZNF865P0CJ78 1059 aaPredicted RBP16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 HSPD1P10809 573 aaKnown RBP16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 AKR1A1P14550 325 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 NT5C2P49902 561 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 NUCB1Q02818 461 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 PRAMEF19Q5SWL8 479 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 STAG1Q8WVM7 1258 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 FAM227BQ96M60 508 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 TCP11L1Q9NUJ3 509 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 CTDP1Q9Y5B0 961 aaPredicted RBP16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 TACC3Q9Y6A5 838 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 CCDC171Q6TFL3 1326 aa16.08■□□□□ 0.16
GTF3C6-201ENST00000329970 LCTP09848 1927 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 TMEM232C9JQI7 657 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 SYN1P17600 705 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 SLC1A4P43007 532 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 MAGEA10P43363 369 aaPredicted RBP16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 LRRC41Q15345 812 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 TKFCQ3LXA3 575 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 GJC2Q5T442 439 aaPredicted RBP16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 GPR153Q6NV75 609 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 PLEKHM2Q8IWE5 1019 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 CPXCR1Q8N123 301 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 DDX11Q96FC9 970 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 RAVER2Q9HCJ3 691 aaKnown RBP16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 STX8Q9UNK0 236 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 LRRC37A2A6NM11 1700 aa16.07■□□□□ 0.16
GTF3C6-201ENST00000329970 ZNF536O15090 1300 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 RANBP6O60518 1105 aaKnown RBP16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 IGHDP01880 384 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 RARBP10826 455 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 NMIQ13287 307 aaPredicted RBP16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 RCSD1Q6JBY9 416 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 SLC39A5Q6ZMH5 540 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 ZNF589Q86UQ0 364 aaPredicted RBP16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 TDHQ8IZJ6 230 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 XPNPEP3Q9NQH7 507 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 PHF24Q9UPV7 400 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 CNPY2Q9Y2B0 182 aa16.06■□□□□ 0.16
GTF3C6-201ENST00000329970 TRIM6-TRIM34B2RNG4 842 aa16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 SNAI1O95863 264 aaPredicted RBP16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 SDSP20132 328 aa16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 MCCP23508 829 aa16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 RTP1P59025 263 aa16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 RNF180Q86T96 592 aa16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 EXOC6Q8TAG9 804 aa16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 DCAF4Q8WV16 495 aa16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 ACAD9Q9H845 621 aa16.05■□□□□ 0.16
GTF3C6-201ENST00000329970 INCENPQ9NQS7 918 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms