RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 PDHBP11177 359 aa17.4■□□□□ 0.38
CLRN1-203ENST00000328863 ERCC3P19447 782 aa17.4■□□□□ 0.38
CLRN1-203ENST00000328863 OAZ1P54368 228 aa17.4■□□□□ 0.38
CLRN1-203ENST00000328863 GRB14Q14449 540 aa17.4■□□□□ 0.38
CLRN1-203ENST00000328863 IFIT1BQ5T764 474 aaKnown RBP17.4■□□□□ 0.38
CLRN1-203ENST00000328863 RCSD1Q6JBY9 416 aa17.4■□□□□ 0.38
CLRN1-203ENST00000328863 KCTD1Q719H9 257 aa17.4■□□□□ 0.38
CLRN1-203ENST00000328863 ENAHQ8N8S7 591 aaPredicted RBP17.4■□□□□ 0.38
CLRN1-203ENST00000328863 PNMA1Q8ND90 353 aa17.4■□□□□ 0.38
CLRN1-203ENST00000328863 ZSWIM5Q9P217 1185 aa17.4■□□□□ 0.38
CLRN1-203ENST00000328863 BIN2Q9UBW5 565 aaPredicted RBP17.4■□□□□ 0.38
CLRN1-203ENST00000328863 HMGCRP04035 888 aa17.39■□□□□ 0.37
CLRN1-203ENST00000328863 PTPREP23469 700 aa17.39■□□□□ 0.37
CLRN1-203ENST00000328863 SOX10P56693 466 aa17.39■□□□□ 0.37
CLRN1-203ENST00000328863 SNRNP48Q6IEG0 339 aaKnown RBP17.39■□□□□ 0.37
CLRN1-203ENST00000328863 RASGRP2Q7LDG7 609 aa17.39■□□□□ 0.37
CLRN1-203ENST00000328863 RIOX2Q8IUF8 465 aa17.39■□□□□ 0.37
CLRN1-203ENST00000328863 TRMT44Q8IYL2 757 aaKnown RBP17.39■□□□□ 0.37
CLRN1-203ENST00000328863 REPS2Q8NFH8 660 aa17.39■□□□□ 0.37
CLRN1-203ENST00000328863 SLC38A10Q9HBR0 1119 aa17.39■□□□□ 0.37
CLRN1-203ENST00000328863 MYH6P13533 1939 aa17.39■□□□□ 0.37
CLRN1-203ENST00000328863 BRCA2P51587 3418 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 SLC15A5A6NIM6 579 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 SLC27A2O14975 620 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 REC8O95072 547 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 XRCC5P13010 732 aaKnown RBP17.38■□□□□ 0.37
CLRN1-203ENST00000328863 ELNP15502 786 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 ZKSCAN1P17029 563 aaPredicted RBP17.38■□□□□ 0.37
CLRN1-203ENST00000328863 CYP2B6P20813 491 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 STAT3P40763 770 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 MAP2K5Q13163 448 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 MORN1Q5T089 497 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 GPATCH4Q5T3I0 446 aaKnown RBP17.38■□□□□ 0.37
CLRN1-203ENST00000328863 CREB3L3Q68CJ9 461 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 STOX1Q6ZVD7 989 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 NKX2-3Q8TAU0 364 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 TMEM106CQ9BVX2 250 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 GJD2Q9UKL4 321 aa17.38■□□□□ 0.37
CLRN1-203ENST00000328863 FRMPD2Q68DX3 1309 aaPredicted RBP17.38■□□□□ 0.37
CLRN1-203ENST00000328863 ATP2A1O14983 1001 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 STRNO43815 780 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 INHAP05111 366 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 ZNF543Q08ER8 600 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 CYB5R4Q7L1T6 521 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 ABRAQ8N0Z2 381 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 ANKS1AQ92625 1134 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 CHMP4CQ96CF2 233 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 SLC5A4Q9NY91 659 aa17.37■□□□□ 0.37
CLRN1-203ENST00000328863 ZNFX1Q9P2E3 1918 aaKnown RBP17.37■□□□□ 0.37
CLRN1-203ENST00000328863 FRMPD3Q5JV73 1810 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 IFIT3O14879 490 aaKnown RBP17.36■□□□□ 0.37
CLRN1-203ENST00000328863 FCER1AP12319 257 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 ADORA2AP29274 412 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 KCTD2Q14681 263 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 WTAPQ15007 396 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 NECTIN1Q15223 517 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 ASPRV1Q53RT3 343 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 SYDE2Q5VT97 1194 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 MB21D2Q8IYB1 491 aaPredicted RBP17.36■□□□□ 0.37
CLRN1-203ENST00000328863 CPXCR1Q8N123 301 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 MMP19Q99542 508 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 PRR12Q9ULL5 1215 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 TAF6LQ9Y6J9 622 aa17.36■□□□□ 0.37
CLRN1-203ENST00000328863 KIAA0100Q14667 2235 aaKnown RBP17.35■□□□□ 0.37
CLRN1-203ENST00000328863 HOXC6P09630 235 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 KRT32Q14532 448 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 SEC23AQ15436 765 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 BTNL9Q6UXG8 535 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 DPP9Q86TI2 863 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 TRIB2Q92519 343 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 USP6NLQ92738 828 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 MTA3Q9BTC8 594 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 RAVER2Q9HCJ3 691 aaKnown RBP17.35■□□□□ 0.37
CLRN1-203ENST00000328863 GPCPD1Q9NPB8 672 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 FBXO40Q9UH90 709 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 PNMA2Q9UL42 364 aa17.35■□□□□ 0.37
CLRN1-203ENST00000328863 MYCP01106 439 aaPredicted RBP17.34■□□□□ 0.37
CLRN1-203ENST00000328863 PARP1P09874 1014 aaKnown RBP17.34■□□□□ 0.37
CLRN1-203ENST00000328863 MCM5P33992 734 aa17.34■□□□□ 0.37
CLRN1-203ENST00000328863 TMEM67Q5HYA8 995 aa17.34■□□□□ 0.37
CLRN1-203ENST00000328863 RANBP17Q9H2T7 1088 aaKnown RBP17.34■□□□□ 0.37
CLRN1-203ENST00000328863 EPB41L2O43491 1005 aaKnown RBP17.33■□□□□ 0.36
CLRN1-203ENST00000328863 PRC1O43663 620 aa17.33■□□□□ 0.36
CLRN1-203ENST00000328863 SLC4A3P48751 1232 aa17.33■□□□□ 0.36
CLRN1-203ENST00000328863 TKFCQ3LXA3 575 aa17.33■□□□□ 0.36
CLRN1-203ENST00000328863 CCDC174Q6PII3 467 aa17.33■□□□□ 0.36
CLRN1-203ENST00000328863 CHST13Q8NET6 341 aa17.33■□□□□ 0.36
CLRN1-203ENST00000328863 TMEM87BQ96K49 555 aa17.33■□□□□ 0.36
CLRN1-203ENST00000328863 ACAD9Q9H845 621 aa17.33■□□□□ 0.36
CLRN1-203ENST00000328863 CCPG1Q9ULG6 757 aa17.33■□□□□ 0.36
CLRN1-203ENST00000328863 ICAM1P05362 532 aa17.32■□□□□ 0.36
CLRN1-203ENST00000328863 CCL5P13501 91 aa17.32■□□□□ 0.36
CLRN1-203ENST00000328863 SLC16A2P36021 539 aa17.32■□□□□ 0.36
CLRN1-203ENST00000328863 ANTXR2P58335 489 aa17.32■□□□□ 0.36
CLRN1-203ENST00000328863 MTFR1Q15390 333 aa17.32■□□□□ 0.36
CLRN1-203ENST00000328863 MFSD14CQ5VZR4 134 aa17.32■□□□□ 0.36
CLRN1-203ENST00000328863 TTBK2Q6IQ55 1244 aa17.32■□□□□ 0.36
CLRN1-203ENST00000328863 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.32■□□□□ 0.36
CLRN1-203ENST00000328863 RNF208Q9H0X6 261 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms