RNA–Protein interactions for RNA: ENST00000328089.10

SPSB1-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB1, Length 3,120 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB1-201ENST00000328089 HDAC6Q9UBN7 1215 aa21.29■■□□□ 1
SPSB1-201ENST00000328089 DDX52Q9Y2R4 599 aaKnown RBP eCLIP21.29■■□□□ 1
SPSB1-201ENST00000328089 MFAP3LO75121 409 aa21.29■■□□□ 1
SPSB1-201ENST00000328089 SSBP05455 408 aaKnown RBP eCLIP21.29■■□□□ 1
SPSB1-201ENST00000328089 COPB1P53618 953 aaKnown RBP21.29■■□□□ 1
SPSB1-201ENST00000328089 ERVK-24P63145 666 aa21.29■■□□□ 1
SPSB1-201ENST00000328089 RAD51AP2Q09MP3 1159 aa21.29■■□□□ 1
SPSB1-201ENST00000328089 FKBP15Q5T1M5 1219 aa21.29■■□□□ 1
SPSB1-201ENST00000328089 TMEM47Q9BQJ4 181 aa21.29■■□□□ 1
SPSB1-201ENST00000328089 XIRP1Q702N8 1843 aaKnown RBP21.28■■□□□ 1
SPSB1-201ENST00000328089 B4DLN1 442 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 SRGAP2O75044 1071 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 IDEP14735 1019 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 DNA2P51530 1060 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 ENOX2Q16206 610 aaKnown RBP21.28■■□□□ 1
SPSB1-201ENST00000328089 NCAPH2Q6IBW4 605 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 CLEC4GQ6UXB4 293 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 AMOTL1Q8IY63 956 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 ANKRD20A12PQ8NF67 263 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 PSMB7Q99436 277 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 MXD3Q9BW11 206 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 ATP8A2Q9NTI2 1148 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 ZMYND10O75800 440 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 SASH3O75995 380 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 FCER1AP12319 257 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 H2AFXP16104 143 aaPredicted RBP21.28■■□□□ 1
SPSB1-201ENST00000328089 ASIC1P78348 528 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 FAM196AQ6ZSG2 479 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 GPCPD1Q9NPB8 672 aa21.28■■□□□ 1
SPSB1-201ENST00000328089 ARPP21Q9UBL0 812 aaPredicted RBP21.28■■□□□ 1
SPSB1-201ENST00000328089 COA7Q96BR5 231 aa21.27■■□□□ 1
SPSB1-201ENST00000328089 BTDP43251 543 aa21.27■■□□□ 1
SPSB1-201ENST00000328089 PDXDC2PQ6P474 469 aa21.27■■□□□ 1
SPSB1-201ENST00000328089 SPATA20Q8TB22 786 aa21.27■■□□□ 1
SPSB1-201ENST00000328089 GTPBP4Q9BZE4 634 aaKnown RBP21.27■■□□□ 1
SPSB1-201ENST00000328089 ZNF219Q9P2Y4 722 aaPredicted RBP21.27■■□□□ 1
SPSB1-201ENST00000328089 SPATA31A5Q5VU36 1347 aa21.27■■□□□ 1
SPSB1-201ENST00000328089 SPATA31A7Q8IWB4 1347 aa21.27■■□□□ 1
SPSB1-201ENST00000328089 CYP27A1Q02318 531 aa21.27■□□□□ 0.99
SPSB1-201ENST00000328089 TERF2Q15554 542 aa21.27■□□□□ 0.99
SPSB1-201ENST00000328089 SAMD1Q6SPF0 538 aaPredicted RBP21.27■□□□□ 0.99
SPSB1-201ENST00000328089 TEX11Q8IYF3 940 aa21.27■□□□□ 0.99
SPSB1-201ENST00000328089 LRRC15Q8TF66 581 aa21.27■□□□□ 0.99
SPSB1-201ENST00000328089 E2F4Q16254 413 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 TXNRD1Q16881 649 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 TCP11X2Q5H9J9 407 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 C12orf60Q5U649 245 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 SLC39A2Q9NP94 309 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 PLA2G4AP47712 749 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 CHMP4BP1P59074 171 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 SH3RF1Q7Z6J0 888 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 NEK11Q8NG66 645 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 KIFC2Q96AC6 838 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 PIGSQ96S52 555 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 EYA3Q99504 573 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 PCDHA6Q9UN73 950 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 PCDHA4Q9UN74 947 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 PCDHA8Q9Y5H6 950 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 MRFAP1Q9Y605 127 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 MYH3P11055 1940 aa21.26■□□□□ 0.99
SPSB1-201ENST00000328089 TTC26A0AVF1 554 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 SMCO2A6NFE2 343 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 PARP1P09874 1014 aaKnown RBP21.25■□□□□ 0.99
SPSB1-201ENST00000328089 KCTD19Q17RG1 926 aaPredicted RBP21.25■□□□□ 0.99
SPSB1-201ENST00000328089 CNBD1Q8NA66 436 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 KANSL2Q9H9L4 492 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 MAD2L2Q9UI95 211 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 PAPPAQ13219 1627 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 EFCAB8A8MWE9 144 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 PLCG1P19174 1290 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 TRIM21P19474 475 aaKnown RBP21.25■□□□□ 0.99
SPSB1-201ENST00000328089 MAP3K9P80192 1104 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 PLEKHA4Q9H4M7 779 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 DISC1Q9NRI5 854 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 NARFQ9UHQ1 456 aa21.25■□□□□ 0.99
SPSB1-201ENST00000328089 PDE4DQ08499 809 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 RPGRQ92834 1020 aaKnown RBP21.24■□□□□ 0.99
SPSB1-201ENST00000328089 ANKRD2Q9GZV1 360 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 POLD4Q9HCU8 107 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 AGPAT5Q9NUQ2 364 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 TBC1D7Q9P0N9 293 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 MYH13Q9UKX3 1938 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 MACROD2A1Z1Q3 448 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 MPHOSPH10O00566 681 aaKnown RBP21.24■□□□□ 0.99
SPSB1-201ENST00000328089 GTPBP6O43824 516 aaPredicted RBP21.24■□□□□ 0.99
SPSB1-201ENST00000328089 MARCH6O60337 910 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 PPP2R5BQ15173 497 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 MFSD14BQ5SR56 506 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 CDKAL1Q5VV42 579 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 CSGALNACT2Q8N6G5 542 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 CDCA7Q9BWT1 371 aaPredicted RBP21.24■□□□□ 0.99
SPSB1-201ENST00000328089 ABHD10Q9NUJ1 306 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 FAM196BA6NMK8 535 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 SLC16A2P36021 539 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 SCNN1DP51172 638 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 CTAGE1Q96RT6 745 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 NYXQ9GZU5 481 aa21.24■□□□□ 0.99
SPSB1-201ENST00000328089 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.24■□□□□ 0.99
SPSB1-201ENST00000328089 USP17L5A8MUK1 530 aa21.23■□□□□ 0.99
SPSB1-201ENST00000328089 BAG3O95817 575 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms