RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 BAZ2BQ9UIF8 2168 aaKnown RBP21.68■■□□□ 1.06
EXOSC3-201ENST00000327304 CYTH3O43739 400 aa21.67■■□□□ 1.06
EXOSC3-201ENST00000327304 SSRP1Q08945 709 aaKnown RBP21.67■■□□□ 1.06
EXOSC3-201ENST00000327304 FAM83BQ5T0W9 1011 aa21.67■■□□□ 1.06
EXOSC3-201ENST00000327304 GPATCH4Q5T3I0 446 aaKnown RBP21.67■■□□□ 1.06
EXOSC3-201ENST00000327304 hCG_1642624A0A1W2PR95 340 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 HMGCS2P54868 508 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 UBE2HP62256 183 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 PPATQ06203 517 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 LZTS2Q9BRK4 669 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 ELP1O95163 1332 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 STK36Q9NRP7 1315 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 FSD2A1L4K1 749 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 UNCXA6NJT0 531 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 SLC16A2P36021 539 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 USP14P54578 494 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 CAVIN1Q6NZI2 390 aaKnown RBP21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 RBM46Q8TBY0 533 aaKnown RBP21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 PIBF1Q8WXW3 757 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 OPTNQ96CV9 577 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 SLC10A4Q96EP9 437 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 SPZ1Q9BXG8 430 aa21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 SCAND2PQ9GZW5 306 aaPredicted RBP21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 V9GY48 417 aaPredicted RBP21.66■■□□□ 1.06
EXOSC3-201ENST00000327304 IRF6O14896 467 aa21.65■■□□□ 1.06
EXOSC3-201ENST00000327304 FIBPO43427 364 aa21.65■■□□□ 1.06
EXOSC3-201ENST00000327304 TOMM70O94826 608 aa21.65■■□□□ 1.06
EXOSC3-201ENST00000327304 TRIM22Q8IYM9 498 aa21.65■■□□□ 1.06
EXOSC3-201ENST00000327304 LPAR1Q92633 364 aa21.65■■□□□ 1.06
EXOSC3-201ENST00000327304 RNF26Q9BY78 433 aaPredicted RBP21.65■■□□□ 1.06
EXOSC3-201ENST00000327304 PTPRFP10586 1907 aa21.65■■□□□ 1.06
EXOSC3-201ENST00000327304 TMEM232C9JQI7 657 aa21.64■■□□□ 1.06
EXOSC3-201ENST00000327304 GJA5P36382 358 aa21.64■■□□□ 1.06
EXOSC3-201ENST00000327304 PPIL2Q13356 520 aa21.64■■□□□ 1.06
EXOSC3-201ENST00000327304 L1TD1Q5T7N2 865 aaKnown RBP21.64■■□□□ 1.06
EXOSC3-201ENST00000327304 C8orf76Q96K31 380 aa21.64■■□□□ 1.06
EXOSC3-201ENST00000327304 AIFM3Q96NN9 605 aa21.64■■□□□ 1.06
EXOSC3-201ENST00000327304 GOLGA6L3A6NEY3 463 aa21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 C19orf81C9J6K1 198 aa21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 PRPF3O43395 683 aaKnown RBP21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 GADD45BO75293 160 aaPredicted RBP21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 VCAM1P19320 739 aa21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 FOSBP53539 338 aa21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 ATL3Q6DD88 541 aa21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 FBXO18Q8NFZ0 1043 aa21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 C12orf42Q96LP6 360 aa21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 VAT1LQ9HCJ6 419 aa21.64■■□□□ 1.05
EXOSC3-201ENST00000327304 MYH6P13533 1939 aa21.63■■□□□ 1.05
EXOSC3-201ENST00000327304 WDR46O15213 610 aaKnown RBP21.63■■□□□ 1.05
EXOSC3-201ENST00000327304 SMARCA1P28370 1054 aa21.63■■□□□ 1.05
EXOSC3-201ENST00000327304 ZNF445P59923 1031 aa21.63■■□□□ 1.05
EXOSC3-201ENST00000327304 PKN1Q16512 942 aa21.63■■□□□ 1.05
EXOSC3-201ENST00000327304 SYAP1Q96A49 352 aaPredicted RBP21.63■■□□□ 1.05
EXOSC3-201ENST00000327304 RIOX1Q9H6W3 641 aa21.63■■□□□ 1.05
EXOSC3-201ENST00000327304 DEXIO95424 95 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 HUNKP57058 714 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 AKAP17AQ02040 695 aaKnown RBP21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 IKQ13123 557 aaPredicted RBP21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 SH3D19Q5HYK7 790 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 ADGRF4Q8IZF3 695 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 CFAP45Q9UL16 551 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 KCNH4Q9UQ05 1017 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 ZSCAN23Q3MJ62 389 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 FAM173BQ6P4H8 233 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 BTNL9Q6UXG8 535 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 PIGSQ96S52 555 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 ALG1Q9BT22 464 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 JMJD4Q9H9V9 463 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 FBXO28Q9NVF7 368 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 TMOD4Q9NZQ9 345 aa21.62■■□□□ 1.05
EXOSC3-201ENST00000327304 MYH15Q9Y2K3 1946 aa21.61■■□□□ 1.05
EXOSC3-201ENST00000327304 CXCL11O14625 94 aa21.61■■□□□ 1.05
EXOSC3-201ENST00000327304 SYDE2Q5VT97 1194 aa21.61■■□□□ 1.05
EXOSC3-201ENST00000327304 HOMER1Q86YM7 354 aa21.61■■□□□ 1.05
EXOSC3-201ENST00000327304 WNK4Q96J92 1243 aa21.61■■□□□ 1.05
EXOSC3-201ENST00000327304 RPAP3Q9H6T3 665 aaPredicted RBP21.61■■□□□ 1.05
EXOSC3-201ENST00000327304 GJB4Q9NTQ9 266 aa21.61■■□□□ 1.05
EXOSC3-201ENST00000327304 TMEM63CQ9P1W3 806 aa21.61■■□□□ 1.05
EXOSC3-201ENST00000327304 A0A0G2JLL6 359 aaPredicted RBP21.6■■□□□ 1.05
EXOSC3-201ENST00000327304 STAT2P52630 851 aa21.6■■□□□ 1.05
EXOSC3-201ENST00000327304 PRRT2Q7Z6L0 340 aaPredicted RBP21.6■■□□□ 1.05
EXOSC3-201ENST00000327304 WASF1Q92558 559 aa21.6■■□□□ 1.05
EXOSC3-201ENST00000327304 TANGO6Q9C0B7 1094 aa21.6■■□□□ 1.05
EXOSC3-201ENST00000327304 OTUD7BQ6GQQ9 843 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 RRP36Q96EU6 259 aaKnown RBP21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 FEM1BQ9UK73 627 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 LOC285556D6RIA3 1793 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 SCG2P13521 617 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 SNAP25P60880 206 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 GUCY1B3Q02153 619 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 PFKFB3Q16875 520 aaPredicted RBP21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 SAPCD2Q86UD0 394 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 SHISA4Q96DD7 197 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 MTMR8Q96EF0 704 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 SPATA32Q96LK8 384 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 ZNF396Q96N95 335 aaPredicted RBP21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 RBM27Q9P2N5 1060 aaKnown RBP21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 PRR12Q9ULL5 1215 aa21.59■■□□□ 1.05
EXOSC3-201ENST00000327304 PLA2G6O60733 806 aa21.58■■□□□ 1.05
EXOSC3-201ENST00000327304 FSTL1Q12841 308 aa21.58■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms