RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ATRNO75882 1429 aa14.49□□□□□ -0.09
HMGCS1-201ENST00000325110 RNF225M0QZC1 329 aaPredicted RBP14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 ZRANB2O95218 330 aaKnown RBP eCLIP14.48□□□□□ -0.093e-15■□□□□ 9
HMGCS1-201ENST00000325110 CYP27A1Q02318 531 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 SETDB2Q96T68 719 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 CNTNAP5Q8WYK1 1306 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 ALS2Q96Q42 1657 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 CCNT1O60563 726 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 ZPR1O75312 459 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 DDAH1O94760 285 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 EIF6P56537 245 aaKnown RBP14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 FAM182BQ5T319 152 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 RASGRP2Q7LDG7 609 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 PNKPQ96T60 521 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 ZHX3Q9H4I2 956 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 TTC26A0AVF1 554 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 CCDC96Q2M329 555 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 OR8K1Q8NGG5 319 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 HPS3Q969F9 1004 aa14.48□□□□□ -0.09
HMGCS1-201ENST00000325110 CCDC151A5D8V7 595 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 DYMQ7RTS9 669 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 HDXQ7Z353 690 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 PLEKHA4Q9H4M7 779 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 MYO6Q9UM54 1294 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 BCL9O00512 1426 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 ZNF658Q5TYW1 1059 aaPredicted RBP14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 TXLNBQ8N3L3 684 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 NOA1Q8NC60 698 aaKnown RBP14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 MMRN2Q9H8L6 949 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 ADAMTS7Q9UKP4 1686 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 FAM205AQ6ZU69 1335 aa14.47□□□□□ -0.09
HMGCS1-201ENST00000325110 N4BP1O75113 896 aaKnown RBP14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 TXKP42681 527 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 VSNL1P62760 191 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 PIP4K2BP78356 416 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 NSUN4Q96CB9 384 aaKnown RBP14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 BRIP1Q9BX63 1249 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 TMEM60Q9H2L4 133 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 RWDD2AQ9UIY3 292 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 NDUFA10O95299 355 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 LDHBP07195 334 aaKnown RBP14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 TECP42680 631 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 RABEP2Q9H5N1 569 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 FAM207AQ9NSI2 230 aaPredicted RBP14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 FAN1Q9Y2M0 1017 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 DCCP43146 1447 aa14.46□□□□□ -0.09
HMGCS1-201ENST00000325110 MYO5AQ9Y4I1 1855 aaKnown RBP14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 CYP2C19P33261 490 aa14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 BRD3Q15059 726 aa14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 ZSCAN26Q16670 478 aa14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 PFKFB3Q16875 520 aaPredicted RBP14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 CDKAL1Q5VV42 579 aa14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 NOC4LQ9BVI4 516 aaKnown RBP14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 ACBD3Q9H3P7 528 aa14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 DISC1Q9NRI5 854 aa14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 SEC63Q9UGP8 760 aaKnown RBP14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 ADAM21Q9UKJ8 722 aa14.46□□□□□ -0.1
HMGCS1-201ENST00000325110 GNPATO15228 680 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 SPA17Q15506 151 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 TXNRD3Q86VQ6 643 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 GSPT2Q8IYD1 628 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 JAKMIP2Q96AA8 810 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 FUT8Q9BYC5 575 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 UBA5Q9GZZ9 404 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 TJP1Q07157 1748 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 LMTK3Q96Q04 1460 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 POTEB2H3BUK9 544 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 KLK7P49862 253 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 RSRC2Q7L4I2 434 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 CABP7Q86V35 215 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 ANKRD13CQ8N6S4 541 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 PYM1Q9BRP8 204 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 GBP3Q9H0R5 595 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 SLC39A2Q9NP94 309 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 SPEF2Q9C093 1822 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 F8W031 263 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 H3BQF6 201 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 PMS1P54277 932 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 TDRD12Q587J7 1177 aaKnown RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 C10orf67Q8IYJ2 551 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 CCDC51Q96ER9 411 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 CCDC42Q96M95 316 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 MTRQ99707 1265 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 TUBGCP2Q9BSJ2 902 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 CRACR2AQ9BSW2 395 aa14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 BSDC1Q9NW68 430 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 BIN2Q9UBW5 565 aaPredicted RBP14.45□□□□□ -0.1
HMGCS1-201ENST00000325110 KRT86O43790 486 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 AKR1B10O60218 316 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 CYLC1P35663 651 aaPredicted RBP14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 FUT2Q10981 343 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 IL17AQ16552 155 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 TBC1D9BQ66K14 1250 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 ARPP21Q9UBL0 812 aaPredicted RBP14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 PICALMQ13492 652 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 FAM98CQ17RN3 349 aaKnown RBP14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 CCDC70Q6NSX1 233 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 USP17L2Q6R6M4 530 aa14.44□□□□□ -0.1
HMGCS1-201ENST00000325110 PCDHA4Q9UN74 947 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms